RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 TAS2R40P59535 323 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 CNGA2Q16280 664 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 PTPN20Q4JDL3 420 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 GNASQ5JWF2 1037 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 DCUN1D2Q6PH85 259 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 DDX42Q86XP3 938 aaKnown RBP eCLIP15.68■□□□□ 0.1
ATL3-203ENST00000538786 JAMLQ86YT9 394 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 TSEN2Q8NCE0 465 aaKnown RBP15.68■□□□□ 0.1
ATL3-203ENST00000538786 HEXIM2Q96MH2 286 aaKnown RBP15.68■□□□□ 0.1
ATL3-203ENST00000538786 ERP44Q9BS26 406 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 TRIM51Q9BSJ1 452 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 UPF3AQ9H1J1 476 aaKnown RBP15.68■□□□□ 0.1
ATL3-203ENST00000538786 CYTH4Q9UIA0 394 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 GABRQQ9UN88 632 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 TMEM88BA6NKF7 163 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 AGPSO00116 658 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 O00370 1275 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 MICAL2O94851 1124 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 SYF2O95926 243 aaKnown RBP15.68■□□□□ 0.1
ATL3-203ENST00000538786 GGCXP38435 758 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 PTGIRP43119 386 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 FNTAP49354 379 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 FLT3LGP49771 235 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 NDST1P52848 882 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 GSCP56915 257 aaPredicted RBP15.68■□□□□ 0.1
ATL3-203ENST00000538786 ZNF252P-AS1Q0IIN9 211 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 PIGHQ14442 188 aaPredicted RBP15.68■□□□□ 0.1
ATL3-203ENST00000538786 SGO2Q562F6 1265 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 UBXN11Q5T124 520 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 CYP4A22Q5TCH4 519 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 DUPD1Q68J44 220 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 TTC27Q6P3X3 843 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 CCDC137Q6PK04 289 aaKnown RBP15.68■□□□□ 0.1
ATL3-203ENST00000538786 NT5C1AQ9BXI3 368 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 LRRC19Q9H756 370 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 WDR35Q9P2L0 1181 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 TUBGCP4Q9UGJ1 667 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 UBQLN1Q9UMX0 589 aaKnown RBP15.68■□□□□ 0.1
ATL3-203ENST00000538786 USTQ9Y2C2 406 aa15.68■□□□□ 0.1
ATL3-203ENST00000538786 AKAP5P24588 427 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 COILP38432 576 aaPredicted RBP15.67■□□□□ 0.1
ATL3-203ENST00000538786 HSPA9P38646 679 aaKnown RBP15.67■□□□□ 0.1
ATL3-203ENST00000538786 DRG2P55039 364 aaKnown RBP15.67■□□□□ 0.1
ATL3-203ENST00000538786 NKX3-2P78367 333 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 TERF2Q15554 542 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 LRRC38Q5VT99 294 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 DAB2IPQ5VWQ8 1189 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 NIPA2Q8N8Q9 360 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 SMC1BQ8NDV3 1235 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 EXD1Q8NHP7 514 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 C18orf25Q96B23 403 aaPredicted RBP15.67■□□□□ 0.1
ATL3-203ENST00000538786 SPC25Q9HBM1 224 aa15.67■□□□□ 0.1
ATL3-203ENST00000538786 SIGLEC16A6NMB1 481 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 M0QYV0 167 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 PODXLO00592 558 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 HSF2BPO75031 334 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 ATF7P17544 494 aaPredicted RBP15.66■□□□□ 0.1
ATL3-203ENST00000538786 SSR1P43307 286 aaKnown RBP15.66■□□□□ 0.1
ATL3-203ENST00000538786 FAM193AP78312 1265 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 OGDHQ02218 1023 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 XKR4Q5GH76 650 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 PAXIP1Q6ZW49 1069 aaPredicted RBP15.66■□□□□ 0.1
ATL3-203ENST00000538786 ZBTB9Q96C00 473 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 CPXM1Q96SM3 734 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 APOL6Q9BWW8 343 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 DPH5Q9H2P9 285 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 GTF2IRD1Q9UHL9 959 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 SNX9Q9Y5X1 595 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 SMIM28A0A1B0GU29 152 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 PPEF2O14830 753 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 SEPT4O43236 478 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 XPOTO43592 962 aaKnown RBP15.66■□□□□ 0.1
ATL3-203ENST00000538786 PGK1P00558 417 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 CD4P01730 458 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 RARBP10826 455 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 KRT3P12035 628 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 KCNE1P15382 129 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 GPD2P43304 727 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 GABRB2P47870 512 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 MRPS6P82932 125 aaKnown RBP15.66■□□□□ 0.1
ATL3-203ENST00000538786 ZNF268Q14587 947 aaPredicted RBP15.66■□□□□ 0.1
ATL3-203ENST00000538786 STILQ15468 1287 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 NBPF20Q3BBV1 942 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 GLRA4Q5JXX5 417 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 C9orf57Q5W0N0 161 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 LCLAT1Q6UWP7 414 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 CXCL17Q6UXB2 119 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 CCDC50Q8IVM0 306 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 SLCO2A1Q92959 643 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 NEUROG2Q9H2A3 272 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 SYNCQ9H7C4 482 aa15.66■□□□□ 0.1
ATL3-203ENST00000538786 F8VP50 259 aa15.65■□□□□ 0.1
ATL3-203ENST00000538786 M0QZ92 97 aa15.65■□□□□ 0.1
ATL3-203ENST00000538786 GBP1P32455 592 aa15.65■□□□□ 0.1
ATL3-203ENST00000538786 PSMC1P62191 440 aaKnown RBP15.65■□□□□ 0.1
ATL3-203ENST00000538786 PRKCZQ05513 592 aa15.65■□□□□ 0.1
ATL3-203ENST00000538786 PDCLQ13371 301 aa15.65■□□□□ 0.1
ATL3-203ENST00000538786 RALGAPA2Q2PPJ7 1873 aa15.65■□□□□ 0.1
ATL3-203ENST00000538786 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
ATL3-203ENST00000538786 XYLT1Q86Y38 959 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms