RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 AMPD2Q01433 879 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 LRRC63Q05C16 580 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 DLX2Q07687 328 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 EDRF1Q3B7T1 1238 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 PDXDC1Q6P996 788 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CEP57Q86XR8 500 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 SLC35F6Q8N357 371 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 C1orf127Q8N9H9 656 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 PLEKHO2Q8TD55 490 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 SLC22A17Q8WUG5 538 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 FAM84AQ96KN4 292 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CNOT6LQ96LI5 555 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 PARD6BQ9BYG5 372 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 ZNHIT6Q9NWK9 470 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 HCFC2Q9Y5Z7 792 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 DOCK6Q96HP0 2047 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 DENND4AQ7Z401 1863 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 EIF3CLB5ME19 914 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 RNF225M0QZC1 329 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 MAPK13O15264 365 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 SPTLC1O15269 473 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 ERLIN1O75477 346 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 C1RP00736 705 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 TKTP29401 623 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CLDN10P78369 228 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CREMQ03060 361 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 TFF2Q03403 129 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 MRPL58Q14197 206 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 DUOXA2Q1HG44 320 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 LMBRD2Q68DH5 695 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 PRSS55Q6UWB4 352 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 PARD3BQ8TEW8 1205 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 ATXN2LQ8WWM7 1075 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 BORCS6Q96GS4 357 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 ANKRD36BP1Q96IX9 119 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 MSLNLQ96KJ4 702 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 EIF3CQ99613 913 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CGRRF1Q99675 332 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CLSTN3Q9BQT9 956 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 IRX2Q9BZI1 471 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 EDEM3Q9BZQ6 932 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 TSGA10Q9BZW7 698 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 MTMR12Q9C0I1 747 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 ITGA11Q9UKX5 1188 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 PCDHB8Q9UN66 801 aa12.34□□□□□ -0.43
SNHG1-206ENST00000537925 REXO2Q9Y3B8 237 aaKnown RBP12.34□□□□□ -0.43
SNHG1-206ENST00000537925 NCOR1O75376 2440 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 TNFRSF10AO00220 468 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 AKAP3O75969 853 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 ITGB3P05106 788 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 ADH1AP07327 375 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 TMEM191BP0C7N4 346 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 KCNA5P22460 613 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 RPL13P26373 211 aaKnown RBP12.33□□□□□ -0.44
SNHG1-206ENST00000537925 KLRC2P26717 231 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 NDUFV1P49821 464 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 TAF6P49848 677 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 CLCN4P51793 760 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
SNHG1-206ENST00000537925 ADAM9Q13443 819 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 PSMD5Q16401 504 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 LEXMQ3ZCV2 418 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
SNHG1-206ENST00000537925 FKBP15Q5T1M5 1219 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 TAF3Q5VWG9 929 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 ANKRD40Q6AI12 368 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 SCARA3Q6AZY7 606 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 WDR59Q6PJI9 974 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 ANKS3Q6ZW76 656 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 ZC3H3Q8IXZ2 948 aaKnown RBP12.33□□□□□ -0.44
SNHG1-206ENST00000537925 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 CCDC127Q96BQ5 260 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 FNBP1Q96RU3 617 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 POP1Q99575 1024 aaKnown RBP12.33□□□□□ -0.44
SNHG1-206ENST00000537925 MTRRQ9UBK8 725 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 AGAP1Q9UPQ3 857 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
SNHG1-206ENST00000537925 CTAGE15A4D2H0 777 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 H3BQ06 376 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-206ENST00000537925 MAP2K7O14733 419 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 KRT86O43790 486 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 TBC1D4O60343 1298 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 TNNC2P02585 160 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 CTAGE8P0CG41 777 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 SRGAP2BP0DMP2 458 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 DLATP10515 647 aaKnown RBP12.32□□□□□ -0.44
SNHG1-206ENST00000537925 EPCAMP16422 314 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 RPL17P18621 184 aaKnown RBP12.32□□□□□ -0.44
SNHG1-206ENST00000537925 TNNI1P19237 187 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 POLR2BP30876 1174 aaKnown RBP12.32□□□□□ -0.44
SNHG1-206ENST00000537925 MRPS5P82675 430 aaKnown RBP12.32□□□□□ -0.44
SNHG1-206ENST00000537925 ENPEPQ07075 957 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms