RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ACSBG2Q5FVE4 666 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 H2AFVQ71UI9 128 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 C12orf42Q96LP6 360 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 SLCO1B3Q9NPD5 702 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 RNF181Q9P0P0 153 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 TBX20Q9UMR3 447 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 GMEB1Q9Y692 573 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 PFASO15067 1338 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ADRB2P07550 413 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 PSAPP07602 524 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 CCDC166P0CW27 439 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 VAV1P15498 845 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ZNF24P17028 368 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 GTF2BQ00403 316 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 PRKCEQ02156 737 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 NFIL3Q16649 462 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 WDR72Q3MJ13 1102 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ARHGEF19Q8IW93 802 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 SULF1Q8IWU6 871 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ATP6V0A1Q93050 837 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 MCUR1Q96AQ8 359 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ASCC2Q9H1I8 757 aaPredicted RBP14.73□□□□□ -0.05
LIG1-203ENST00000536218 R3HDMLQ9H3Y0 253 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ANKEF1Q9NU02 776 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 ADAMTS5Q9UNA0 930 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 CSADQ9Y600 493 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 SNCAIPQ9Y6H5 919 aa14.73□□□□□ -0.05
LIG1-203ENST00000536218 MAGEB3O15480 346 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 DLATP10515 647 aaKnown RBP14.72□□□□□ -0.05
LIG1-203ENST00000536218 ADSSP30520 456 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 GJA8P48165 433 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 WDR78Q5VTH9 848 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 VPS52Q8N1B4 723 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 SAMD3Q8N6K7 520 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 TMEM161BQ8NDZ6 487 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 LNX1Q8TBB1 728 aaPredicted RBP14.72□□□□□ -0.05
LIG1-203ENST00000536218 DCPSQ96C86 337 aaKnown RBP14.72□□□□□ -0.05
LIG1-203ENST00000536218 MIS12Q9H081 205 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 ACP6Q9NPH0 428 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 TOPORSQ9NS56 1045 aaPredicted RBP14.72□□□□□ -0.05
LIG1-203ENST00000536218 TAC1P20366 129 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 TNFAIP3P21580 790 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 PRKCIP41743 596 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 GALK1P51570 392 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 GALCP54803 685 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 CETN1Q12798 172 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 MKRN3Q13064 507 aaKnown RBP14.72□□□□□ -0.05
LIG1-203ENST00000536218 AADACL2Q6P093 401 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 IZUMO2Q6UXV1 221 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 ARHGEF18Q6ZSZ5 1173 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 PALB2Q86YC2 1186 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 SLC9A9Q8IVB4 645 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 CYP4X1Q8N118 509 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 RASGEF1CQ8N431 466 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 ZBTB8BQ8NAP8 495 aaPredicted RBP14.72□□□□□ -0.05
LIG1-203ENST00000536218 NAT14Q8WUY8 206 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 POMGNT1Q8WZA1 660 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 TMEM143Q96AN5 459 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 PRDM16Q9HAZ2 1276 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 DDX18Q9NVP1 670 aaKnown RBP14.72□□□□□ -0.05
LIG1-203ENST00000536218 ARHGEF38Q9NXL2 777 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 BTBD7Q9P203 1132 aa14.72□□□□□ -0.05
LIG1-203ENST00000536218 CHORDC1Q9UHD1 332 aaPredicted RBP14.72□□□□□ -0.05
LIG1-203ENST00000536218 PTPN4P29074 926 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 OAZ1P54368 228 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 KBTBD12Q3ZCT8 623 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 ST13P4Q8IZP2 240 aaPredicted RBP14.71□□□□□ -0.05
LIG1-203ENST00000536218 PPM1KQ8N3J5 372 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 MAGEB18Q96M61 343 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 HAPLN3Q96S86 360 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 CYTH2Q99418 400 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 TAS2R14Q9NYV8 317 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 HSFX1Q9UBD0 423 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 ZFP69BQ9UJL9 534 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 A0A0J9YVX5 310 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 HNRNPDLO14979 420 aaKnown RBP14.71□□□□□ -0.05
LIG1-203ENST00000536218 DCTN3O75935 186 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 OR6B1O95007 311 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 PSMG1O95456 288 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 BAG2O95816 211 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 PAX3P23760 479 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 MXI1P50539 228 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 AP1B1Q10567 949 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 STRN3Q13033 797 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 STXBP2Q15833 593 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 SNRNP35Q16560 246 aaKnown RBP14.71□□□□□ -0.05
LIG1-203ENST00000536218 MARK2Q7KZI7 788 aaKnown RBP14.71□□□□□ -0.05
LIG1-203ENST00000536218 NT5DC3Q86UY8 548 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 NCSTNQ92542 709 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 ZNF653Q96CK0 615 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 OSGEPQ9NPF4 335 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 SUCLA2Q9P2R7 463 aaPredicted RBP14.71□□□□□ -0.05
LIG1-203ENST00000536218 PHTF1Q9UMS5 762 aa14.71□□□□□ -0.05
LIG1-203ENST00000536218 ADGRA3Q8IWK6 1321 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 TMEM110-MUSTN1A8MSY1 372 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 CDK7P50613 346 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 ALCAMQ13740 583 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 LLGL1Q15334 1064 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 C1orf220Q5T0J3 134 aa14.71□□□□□ -0.06
LIG1-203ENST00000536218 DUS1LQ6P1R4 473 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms