RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SPECC1L-ADORA2AF8WAN1 911 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 MEFVO15553 781 aaPredicted RBP14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 FAM189A1O60320 539 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 ITGB3P05106 788 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 POLR2BP30876 1174 aaKnown RBP14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 FCHO2Q0JRZ9 810 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 GRSF1Q12849 480 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 MAPRE1Q15691 268 aaKnown RBP14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 ITPRIPL2Q3MIP1 535 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 WSCD1Q658N2 575 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 TSSK4Q6SA08 328 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 C4orf50Q6ZRC1 276 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 CEP68Q76N32 757 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 TMC8Q8IU68 726 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 BRSK2Q8IWQ3 736 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 SPEM1Q8N4L4 309 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 LRRC52Q8N7C0 313 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 ZBTB44Q8NCP5 570 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 TTC16Q8NEE8 873 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 SPATA18Q8TC71 538 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 GIPC2Q8TF65 315 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 SAAL1Q96ER3 474 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 EPC1Q9H2F5 836 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 CUEDC2Q9H467 287 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 KIAA1586Q9HCI6 787 aa14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 DDX43Q9NXZ2 648 aaKnown RBP14.25□□□□□ -0.13
CLSTN3-205ENST00000535452 ZNF233A6NK53 670 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 PPEF2O14830 753 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 EXTL3O43909 919 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 SOAT2O75908 522 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 HAPLN1P10915 354 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 TRIM21P19474 475 aaKnown RBP14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 SYT1P21579 422 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 ANXA13P27216 316 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 GRIN1Q05586 938 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 CUL4AQ13619 759 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 SIM2Q14190 667 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 LAIR1Q6GTX8 287 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 SLC39A4Q6P5W5 647 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 GPD1LQ8N335 351 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 PDILTQ8N807 584 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 OR10T2Q8NGX3 314 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 FNBP1Q96RU3 617 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 LPIN3Q9BQK8 851 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 ACBD6Q9BR61 282 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 PANK2Q9BZ23 570 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 DNAJC25Q9H1X3 360 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 TNMDQ9H2S6 317 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 FBXO2Q9UK22 296 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 SNX9Q9Y5X1 595 aa14.24□□□□□ -0.13
CLSTN3-205ENST00000535452 MYMKA6NI61 221 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 STX6O43752 255 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 MOSPD3O75425 235 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 PRPF6O94906 941 aaKnown RBP14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 WEE1P30291 646 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 CTHP32929 405 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 CYP4F8P98187 520 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 NR1H3Q13133 447 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 HS2ST1Q7LGA3 356 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 LONP2Q86WA8 852 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 MAML2Q8IZL2 1156 aaPredicted RBP14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 CMTM8Q8IZV2 173 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 CPA6Q8N4T0 437 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 TOP6BLQ8N6T0 577 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 IQUBQ8NA54 791 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 SUMF1Q8NBK3 374 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 TTC8Q8TAM2 541 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 CLIC6Q96NY7 704 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 TMEM209Q96SK2 561 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 TRPC7Q9HCX4 862 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 ABCB6Q9NP58 842 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 SLC8A2Q9UPR5 921 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 FAM186AA6NE01 2351 aa14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 PDCD11Q14690 1871 aaKnown RBP14.23□□□□□ -0.13
CLSTN3-205ENST00000535452 TRAV19A0A0A6YYK7 116 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 MYBPHLA2RUH7 354 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 K7ELQ4 463 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 CKMP06732 381 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 ASIC1P78348 528 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 KCNB1Q14721 858 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 SLC39A14Q15043 492 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 PON2Q15165 354 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 PDGFRLQ15198 375 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 DUOXA2Q1HG44 320 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 RSPO4Q2I0M5 234 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 STXBP5Q5T5C0 1151 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 GAREM2Q75VX8 874 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 DPH6Q7L8W6 267 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 GPIHBP1Q8IV16 184 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 SCN4BQ8IWT1 228 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 ADGRF2Q8IZF7 708 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 DCLK2Q8N568 766 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 MAB21L3Q8N8X9 362 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 LEO1Q8WVC0 666 aaPredicted RBP14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 RMDN1Q96DB5 314 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 MMS19Q96T76 1030 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 PI4K2AQ9BTU6 479 aa14.22□□□□□ -0.13
CLSTN3-205ENST00000535452 CRISPLD1Q9H336 500 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms