RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CDH19Q9H159 772 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 SLC12A5Q9H2X9 1139 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 CFAP97Q9P2B7 532 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 RNF7Q9UBF6 113 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 IP6K2Q9UHH9 426 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 TLK1Q9UKI8 766 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 ZDHHC8Q9ULC8 765 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 CFAP65Q6ZU64 1925 aaKnown RBP4.46□□□□□ -1.7
USP48-215ENST00000534705 ARHGAP5Q13017 1502 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 MAP3K1Q13233 1512 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 REREQ9P2R6 1566 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 PLEKHD1A6NEE1 506 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 OFD1O75665 1012 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 AGFG2O95081 481 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 ESRRBO95718 433 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 FTLP02792 175 aaPredicted RBP4.45□□□□□ -1.7
USP48-215ENST00000534705 GNAI3P08754 354 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 U2AF1L5P0DN76 240 aaPredicted RBP4.45□□□□□ -1.7
USP48-215ENST00000534705 SMARCA1P28370 1054 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 GNAI1P63096 354 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 HSD11B2P80365 405 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 U2AF1Q01081 240 aaKnown RBP eCLIP4.45□□□□□ -1.71e-7■□□□□ 11.3
USP48-215ENST00000534705 PIGFQ07326 219 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 FOXI1Q12951 378 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 TP53BP2Q13625 1128 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 CYP2A13Q16696 494 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 FLYWCH1Q4VC44 716 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 COLGALT2Q8IYK4 626 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 ANKRD13AQ8IZ07 590 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 Q8NA96 180 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 ASB10Q8WXI3 467 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 SCAMP4Q969E2 229 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 RNF31Q96EP0 1072 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 MARS2Q96GW9 593 aaKnown RBP4.45□□□□□ -1.7
USP48-215ENST00000534705 KLHL32Q96NJ5 620 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 MAP3K14Q99558 947 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 RTFDC1Q9BY42 306 aaPredicted RBP4.45□□□□□ -1.7
USP48-215ENST00000534705 SLC29A3Q9BZD2 475 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 HSFX1Q9UBD0 423 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 USP25Q9UHP3 1055 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 FEZ2Q9UHY8 353 aaPredicted RBP4.45□□□□□ -1.7
USP48-215ENST00000534705 MAP3K2Q9Y2U5 619 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 ZFYVE16Q7Z3T8 1539 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 SYCP2Q9BX26 1530 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 GPATCH8Q9UKJ3 1502 aaKnown RBP4.45□□□□□ -1.7
USP48-215ENST00000534705 POGZQ7Z3K3 1410 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 VPS8Q8N3P4 1428 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 C3P01024 1663 aa4.45□□□□□ -1.7
USP48-215ENST00000534705 DENND4BO75064 1496 aaPredicted RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 COL3A1P02461 1466 aaPredicted RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 CCDC78A2IDD5 438 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 UNC119BA6NIH7 251 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 E7ENX8 843 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 CT47B1P0C2W7 299 aaPredicted RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 KCNA2P16389 499 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 PRDX5P30044 214 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 PIK3CGP48736 1102 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 PTH2RP49190 550 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 MAP2K6P52564 334 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 TAP2Q03519 686 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 ZNF844Q08AG5 666 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 TCF15Q12870 199 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 KIF22Q14807 665 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 CCDC93Q567U6 631 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 UTP14CQ5TAP6 766 aaKnown RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 EMC10Q5UCC4 262 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 CXorf57Q6NSI4 855 aaKnown RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 HEATR3Q7Z4Q2 680 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 CATIPQ7Z7H3 387 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 JPH3Q8WXH2 748 aaPredicted RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 NACC2Q96BF6 587 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 C1GALT1C1Q96EU7 318 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 VRK1Q99986 396 aaPredicted RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 DUSP26Q9BV47 211 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 BRD9Q9H8M2 597 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 GPR35Q9HC97 309 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 NMRK2Q9NPI5 230 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 ZNF180Q9UJW8 692 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 THRAP3Q9Y2W1 955 aaKnown RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 MTO1Q9Y2Z2 717 aaKnown RBP4.44□□□□□ -1.7
USP48-215ENST00000534705 YEATS2Q9ULM3 1422 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 PLXNC1O60486 1568 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 MAST3O60307 1309 aa4.44□□□□□ -1.7
USP48-215ENST00000534705 AATKQ6ZMQ8 1374 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 MROH2AA6NES4 1674 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 PRAMEF33A0A0G2JMD5 474 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 CCDC195A0A1B0GUA6 201 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 DNAJC9-AS1A6NH13 148 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 LRRC14BA6NHZ5 514 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 PRAMEF10O60809 474 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 ZFPL1O95159 310 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 IGLV2-14P01704 120 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 RARBP10826 455 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 TYRP14679 529 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 HSPA6P17066 643 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 ANXA11P50995 505 aaKnown RBP4.43□□□□□ -1.7
USP48-215ENST00000534705 RAB27AP51159 221 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 NKX6-1P78426 367 aaPredicted RBP4.43□□□□□ -1.7
USP48-215ENST00000534705 MPP3Q13368 585 aa4.43□□□□□ -1.7
USP48-215ENST00000534705 GTF2H3Q13889 308 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms