RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TMOD4Q9NZQ9 345 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 PCYOX1Q9UHG3 505 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 FEM1BQ9UK73 627 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 CCPG1Q9ULG6 757 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 COL4A5P29400 1685 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 FOXO6A8MYZ6 492 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 TCEA3O75764 348 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 CDK4P11802 303 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 CHRNA3P32297 505 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 TBC1D10BQ4KMP7 808 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-210ENST00000534405 AADACL2Q6P093 401 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 ARL10Q8N8L6 244 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 DEFB129Q9H1M3 183 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 TAOK3Q9H2K8 898 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 CLIC5Q9NZA1 410 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 BTBD7Q9P203 1132 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 CHORDC1Q9UHD1 332 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-210ENST00000534405 SCAF8Q9UPN6 1271 aaKnown RBP20.18■□□□□ 0.82
SMPD1-210ENST00000534405 PSME4Q14997 1843 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 STRNO43815 780 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 ALAS1P13196 640 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 RARRES1P49788 294 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 VAMP7P51809 220 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 WDR4P57081 412 aaKnown RBP20.18■□□□□ 0.82
SMPD1-210ENST00000534405 HNRNPDQ14103 355 aaKnown RBP20.18■□□□□ 0.82
SMPD1-210ENST00000534405 SATL1Q86VE3 508 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 GAB3Q8WWW8 586 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 CLEC4DQ8WXI8 215 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 C18orf8Q96DM3 657 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 SIKE1Q9BRV8 207 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 TUBB6Q9BUF5 446 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 ARHGEF38Q9NXL2 777 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 LGALS13Q9UHV8 139 aa20.18■□□□□ 0.82
SMPD1-210ENST00000534405 C2CD2LO14523 706 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 WDR46O15213 610 aaKnown RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 EDF1O60869 148 aaKnown RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 P4HBP07237 508 aaKnown RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 KRT13P13646 458 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 PORP16435 677 aaPredicted RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 DNAJC3Q13217 504 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 ZNF746Q6NUN9 644 aaPredicted RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 TRMT1LQ7Z2T5 733 aaKnown RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 CLNKQ7Z7G1 428 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 FNBP1Q96RU3 617 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 LOXHD1Q8IVV2 1947 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 ICAM1P05362 532 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 GALK1P51570 392 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 MRPS9P82933 396 aaKnown RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 DCTN2Q13561 401 aaKnown RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 DGKZQ13574 1117 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 MYBPC2Q14324 1141 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 EPC2Q52LR7 807 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 CYFIP1Q7L576 1253 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 PTCD3Q96EY7 689 aaKnown RBP20.17■□□□□ 0.82
SMPD1-210ENST00000534405 ABHD8Q96I13 439 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 GPRC5CQ9NQ84 441 aa20.17■□□□□ 0.82
SMPD1-210ENST00000534405 SERPINB8P50452 374 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 UGCGQ16739 394 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 TKFCQ3LXA3 575 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 OLFML1Q6UWY5 402 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 GFM2Q969S9 779 aaKnown RBP20.16■□□□□ 0.82
SMPD1-210ENST00000534405 LBHD1Q9BQE6 289 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-210ENST00000534405 ACP6Q9NPH0 428 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 CYLDQ9NQC7 956 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 FAIMQ9NVQ4 179 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 HSPBP1Q9NZL4 362 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 ALG6Q9Y672 507 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 OPHN1O60890 802 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 OR6B1O95007 311 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 FTLP02792 175 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-210ENST00000534405 MARCKSL1P49006 195 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 NLRP9Q7RTR0 991 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 ALDH16A1Q8IZ83 802 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 ATP11CQ8NB49 1132 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 KRT35Q92764 455 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 AGO4Q9HCK5 861 aaKnown RBP20.16■□□□□ 0.82
SMPD1-210ENST00000534405 TRPV5Q9NQA5 729 aa20.16■□□□□ 0.82
SMPD1-210ENST00000534405 VILLO15195 856 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ACSL3O95573 720 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 TROVE2P10155 538 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMPD1-210ENST00000534405 PLS3P13797 630 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 HSPA6P17066 643 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 GTF2H1P32780 548 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 MTTPP55157 894 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 CDC16Q13042 620 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ACCSQ96QU6 501 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 PCDHB18PQ96TA0 734 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 TMEM206Q9H813 350 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ZDHHC7Q9NXF8 308 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 DNAJB4Q9UDY4 337 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 PGAP2Q9UHJ9 254 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 EFR3BQ9Y2G0 817 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 FAM47DPA6NHR8 397 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 F8W8V4 182 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 MAGEB3O15480 346 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 GYG2O15488 501 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 TBC1D12O60347 775 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ALDH2P05091 517 aa20.15■□□□□ 0.82
SMPD1-210ENST00000534405 HARSP12081 509 aaKnown RBP20.15■□□□□ 0.82
SMPD1-210ENST00000534405 ANPEPP15144 967 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms