RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 P4HA1P13674 534 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 CDC25CP30307 473 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 WNT7BP56706 349 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 RPL10AP62906 217 aaKnown RBP16.58■□□□□ 0.24
UBXN1-217ENST00000534176 TNNC1P63316 161 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 NTHL1P78549 312 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 MGAT5BQ3V5L5 792 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 CFAP221Q4G0U5 840 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 ARHGAP15Q53QZ3 475 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 COBLL1Q53SF7 1204 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 INTS8Q75QN2 995 aaKnown RBP16.58■□□□□ 0.24
UBXN1-217ENST00000534176 LIMS2Q7Z4I7 341 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 FMR1NBQ8N0W7 255 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-217ENST00000534176 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 OR5B17Q8NGF7 314 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 FEZF2Q8TBJ5 459 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 PARD3BQ8TEW8 1205 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 TAF4BQ92750 862 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 CCDC127Q96BQ5 260 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 DNAI2Q9GZS0 605 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 TRPV4Q9HBA0 871 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 ZFP14Q9HCL3 533 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 EHD2Q9NZN4 543 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 CEP72Q9P209 647 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 UXTQ9UBK9 157 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-217ENST00000534176 CDH9Q9ULB4 789 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 L1RE1Q9UN81 338 aa16.58■□□□□ 0.24
UBXN1-217ENST00000534176 OR4Q2P0C623 313 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 RFX1P22670 979 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 WEE1P30291 646 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 EDRF1Q3B7T1 1238 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 INTS6LQ5JSJ4 861 aaKnown RBP16.57■□□□□ 0.24
UBXN1-217ENST00000534176 ASTLQ6HA08 431 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-217ENST00000534176 FAM200AQ8TCP9 573 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 DEPDC1BQ8WUY9 529 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 FAM122AQ96E09 287 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 SEPT5Q99719 369 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-217ENST00000534176 GOLPH3LQ9H4A5 285 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
UBXN1-217ENST00000534176 CSH1P0DML2 217 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 CSH2P0DML3 217 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 HAPLN1P10915 354 aaPredicted RBP16.56■□□□□ 0.24
UBXN1-217ENST00000534176 KRT13P13646 458 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 WARSP23381 471 aaKnown RBP16.56■□□□□ 0.24
UBXN1-217ENST00000534176 NR2F2P24468 414 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 DDX6P26196 483 aaKnown RBP eCLIP16.56■□□□□ 0.245e-6■□□□□ 8.4
UBXN1-217ENST00000534176 AVPR2P30518 371 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 PTPN5P54829 565 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 PRKCQQ04759 706 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 STIM1Q13586 685 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 SLC5A9Q2M3M2 681 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 SOWAHAQ2M3V2 549 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 PHLDB3Q6NSJ2 640 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 C1orf228Q6PIY5 440 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 PARM1Q6UWI2 310 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 VSTM1Q6UX27 236 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 DNAJB7Q7Z6W7 309 aaPredicted RBP16.56■□□□□ 0.24
UBXN1-217ENST00000534176 DNASE1L2Q92874 299 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 FGF14Q92915 247 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 SMARCD2Q92925 531 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 MKNK1Q9BUB5 465 aa16.56■□□□□ 0.24
UBXN1-217ENST00000534176 ABI2Q9NYB9 513 aaPredicted RBP16.56■□□□□ 0.24
UBXN1-217ENST00000534176 PTPRJQ12913 1337 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 STX10O60499 249 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 KINO60870 393 aaKnown RBP16.55■□□□□ 0.24
UBXN1-217ENST00000534176 VNN2O95498 520 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 MYL4P12829 197 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 PSMC2P35998 433 aaKnown RBP16.55■□□□□ 0.24
UBXN1-217ENST00000534176 PLA2G5P39877 138 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 MAGEA11P43364 429 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 BIRC3Q13489 604 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 SNW1Q13573 536 aaKnown RBP16.55■□□□□ 0.24
UBXN1-217ENST00000534176 SGSM1Q2NKQ1 1148 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 WDR72Q3MJ13 1102 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 LMBRD2Q68DH5 695 aaPredicted RBP16.55■□□□□ 0.24
UBXN1-217ENST00000534176 SPATA2LQ8IUW3 424 aaPredicted RBP16.55■□□□□ 0.24
UBXN1-217ENST00000534176 SIX5Q8N196 739 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 ENGASEQ8NFI3 743 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 RSAD2Q8WXG1 361 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 MCRS1Q96EZ8 462 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 FAXDC2Q96IV6 333 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 ASB16Q96NS5 453 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 TSG101Q99816 390 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 IMPG2Q9BZV3 1241 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 DNAJC25Q9H1X3 360 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 SLITRK6Q9H5Y7 841 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 TRPV5Q9NQA5 729 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 ARHGEF3Q9NR81 526 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 OBP2AQ9NY56 170 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 SLC27A5Q9Y2P5 690 aa16.55■□□□□ 0.24
UBXN1-217ENST00000534176 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 CEBPBP17676 345 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 AOC1P19801 751 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 GTF2H1P32780 548 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
UBXN1-217ENST00000534176 ZNF658Q5TYW1 1059 aaPredicted RBP16.54■□□□□ 0.24
UBXN1-217ENST00000534176 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
UBXN1-217ENST00000534176 FAM171BQ6P995 826 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms