RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PDXKO00764 312 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 ECI2O75521 394 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 NPR3P17342 541 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 GPC5P78333 572 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 MYL7Q01449 175 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 SOWAHAQ2M3V2 549 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 MGAT5BQ3V5L5 792 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 DPH6Q7L8W6 267 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 TMC8Q8IU68 726 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 SLC9A9Q8IVB4 645 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 ADGRF2Q8IZF7 708 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 PSMG2Q969U7 264 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 GZF1Q9H116 711 aaPredicted RBP32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 CA14Q9ULX7 337 aa32.53■■■□□ 2.8
SSSCA1-207ENST00000533115 KRBA1A5PL33 1030 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 LHX1P48742 406 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 CLCN5P51795 746 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 CWF19L1Q69YN2 538 aaKnown RBP32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 DNAJB7Q7Z6W7 309 aaPredicted RBP32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 ITIH5Q86UX2 942 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 OSTM1Q86WC4 334 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 TMEM105Q8N8V8 129 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 PRSS33Q8NF86 280 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 TMLHEQ9NVH6 421 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 ABI2Q9NYB9 513 aaPredicted RBP32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 PCDHB5Q9Y5E4 795 aa32.52■■■□□ 2.8
SSSCA1-207ENST00000533115 GOLGA6L4A6NEF3 574 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 GABRDO14764 452 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 KIF20AO95235 890 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 CST3P01034 146 aaPredicted RBP32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 GJA1P17302 382 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 FAM78AQ5JUQ0 283 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 LIMS2Q7Z4I7 341 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 SHKBP1Q8TBC3 707 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 ZNF516Q92618 1163 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 CCDC34Q96HJ3 373 aa32.51■■■□□ 2.79
SSSCA1-207ENST00000533115 HAPLN1P10915 354 aaPredicted RBP32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 ACAT1P24752 427 aaKnown RBP32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 NUBP1P53384 320 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 TEAD2Q15562 447 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 NFE2Q16621 373 aaPredicted RBP32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 INTS6LQ5JSJ4 861 aaKnown RBP32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 TANGO2Q6ICL3 276 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 FAM200AQ8TCP9 573 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 ELSPBP1Q96BH3 223 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 ZSWIM3Q96MP5 696 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 ASB16Q96NS5 453 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 LPIN3Q9BQK8 851 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 PLA2G2FQ9BZM2 168 aa32.5■■■□□ 2.79
SSSCA1-207ENST00000533115 NR3C1P04150 777 aa32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 ATF6P18850 670 aa32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 FCARP24071 287 aa32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 KCNB1Q14721 858 aa32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 VEPH1Q14D04 833 aa32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 FMR1NBQ8N0W7 255 aaPredicted RBP32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 PLEKHO2Q8TD55 490 aa32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 GPR88Q9GZN0 384 aa32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 ZNF334Q9HCZ1 680 aaPredicted RBP32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 ARHGEF3Q9NR81 526 aa32.49■■■□□ 2.79
SSSCA1-207ENST00000533115 A0A1W2PRU2 124 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 AOC1P19801 751 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 PCSK1P29120 753 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 CASP4P49662 377 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 PARD3BQ8TEW8 1205 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 SMARCD2Q92925 531 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 PKMYT1Q99640 499 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 ZFP14Q9HCL3 533 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 TRAF3IP3Q9Y228 551 aa32.48■■■□□ 2.79
SSSCA1-207ENST00000533115 CALUO43852 315 aaPredicted RBP32.47■■■□□ 2.79
SSSCA1-207ENST00000533115 FGF19O95750 216 aa32.47■■■□□ 2.79
SSSCA1-207ENST00000533115 TRPC3Q13507 836 aa32.47■■■□□ 2.79
SSSCA1-207ENST00000533115 KBTBD7Q8WVZ9 684 aa32.47■■■□□ 2.79
SSSCA1-207ENST00000533115 MMS19Q96T76 1030 aa32.47■■■□□ 2.79
SSSCA1-207ENST00000533115 PI4K2AQ9BTU6 479 aa32.47■■■□□ 2.79
SSSCA1-207ENST00000533115 GTF3C4Q9UKN8 822 aa32.47■■■□□ 2.79
SSSCA1-207ENST00000533115 STK25O00506 426 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 HCRTO43612 131 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 AP3M2P53677 418 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 PTPN5P54829 565 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 CLDN10P78369 228 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 GAREM2Q75VX8 874 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 GIPC2Q8TF65 315 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 SLITRK6Q9H5Y7 841 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 ABCB6Q9NP58 842 aa32.46■■■□□ 2.79
SSSCA1-207ENST00000533115 LRRIQ3A6PVS8 624 aaPredicted RBP32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 PI15O43692 258 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 RFX1P22670 979 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 WARSP23381 471 aaKnown RBP32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 GABRR2P28476 465 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 PFKPQ01813 784 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 NHLH1Q02575 133 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 TCF15Q12870 199 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 TAF12Q16514 161 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 GUF1Q8N442 669 aaKnown RBP32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 ZSCAN18Q8TBC5 510 aaPredicted RBP32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 ATXN3LQ9H3M9 355 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 TBC1D17Q9HA65 648 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 TRPV4Q9HBA0 871 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 MAPK8IP1Q9UQF2 711 aa32.45■■■□□ 2.79
SSSCA1-207ENST00000533115 PHACTR2O75167 634 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms