RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 FAM171A1Q5VUB5 890 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 SFMBT2Q5VUG0 894 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 SMYD5Q6GMV2 418 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.26■□□□□ 0.03
COL16A1-217ENST00000532877 SPRED2Q7Z698 418 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 RBBP8NLQ8NC74 664 aaPredicted RBP15.26■□□□□ 0.03
COL16A1-217ENST00000532877 OR6B3Q8NGW1 331 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 SPATA18Q8TC71 538 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 WHAMMQ8TF30 809 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 TWNKQ96RR1 684 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 PPP1R9BQ96SB3 815 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 C1QTNF1Q9BXJ1 281 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 NUCKS1Q9H1E3 243 aaKnown RBP15.26■□□□□ 0.03
COL16A1-217ENST00000532877 SNX25Q9H3E2 840 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 NME7Q9Y5B8 376 aa15.26■□□□□ 0.03
COL16A1-217ENST00000532877 HCRTO43612 131 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 FGF18O76093 207 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 FGFR3P22607 806 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 BMPR1AP36894 532 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 ARID5AQ03989 594 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 YWHAHQ04917 246 aaPredicted RBP15.25■□□□□ 0.03
COL16A1-217ENST00000532877 RAB30Q15771 203 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 ZNF394Q53GI3 561 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 OVOS1Q6IE37 1185 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 TAS1R1Q7RTX1 841 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 CCDC186Q7Z3E2 898 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 UNC93AQ86WB7 457 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 METTL23Q86XA0 190 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 FMNL3Q8IVF7 1028 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 KLHL23Q8NBE8 558 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 OR8K1Q8NGG5 319 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 SYN2Q92777 582 aaPredicted RBP15.25■□□□□ 0.03
COL16A1-217ENST00000532877 B3GALT6Q96L58 329 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 C17orf80Q9BSJ5 609 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 HERC2P3Q9BVR0 1158 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 PLVAPQ9BX97 442 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 ELOVL4Q9GZR5 314 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 AIPL1Q9NZN9 384 aa15.25■□□□□ 0.03
COL16A1-217ENST00000532877 A8MXQ7 604 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 C5orf67F2Z3F1 127 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 CYP26A1O43174 497 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 SOD2P04179 222 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 FERP16591 822 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 LMO2P25791 158 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 HNRNPH3P31942 346 aaKnown RBP15.24■□□□□ 0.03
COL16A1-217ENST00000532877 CLCN1P35523 988 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 GNL1P36915 607 aaPredicted RBP15.24■□□□□ 0.03
COL16A1-217ENST00000532877 LHX1P48742 406 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 RAD23BP54727 409 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 PLCB3Q01970 1234 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 TAP1Q03518 808 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 ORC1Q13415 861 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 ASIC2Q16515 512 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 USP41Q3LFD5 358 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 RTP2Q5QGT7 225 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 VARS2Q5ST30 1063 aaKnown RBP15.24■□□□□ 0.03
COL16A1-217ENST00000532877 DDX53Q86TM3 631 aaKnown RBP15.24■□□□□ 0.03
COL16A1-217ENST00000532877 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 PANX2Q96RD6 677 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 TGS1Q96RS0 853 aaKnown RBP15.24■□□□□ 0.03
COL16A1-217ENST00000532877 RTP3Q9BQQ7 232 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 LRFN3Q9BTN0 628 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 TTPALQ9BTX7 342 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 NT5C1AQ9BXI3 368 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 NKX2-4Q9H2Z4 354 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 DPEP3Q9H4B8 488 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 ACP6Q9NPH0 428 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 DDX43Q9NXZ2 648 aaKnown RBP15.24■□□□□ 0.03
COL16A1-217ENST00000532877 MSRAQ9UJ68 235 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 MTUS1Q9ULD2 1270 aa15.24■□□□□ 0.03
COL16A1-217ENST00000532877 OAZ2O95190 189 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 CALCAP01258 141 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
COL16A1-217ENST00000532877 KRT17Q04695 432 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 MEA1Q16626 185 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 PPP2R2DQ66LE6 453 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 WDR59Q6PJI9 974 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 IRF2BP2Q7Z5L9 587 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 SLC47A2Q86VL8 602 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 SLC4A11Q8NBS3 891 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 TMEM176AQ96HP8 235 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 CHST7Q9NS84 486 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 STK39Q9UEW8 545 aa15.23■□□□□ 0.03
COL16A1-217ENST00000532877 RB1P06400 928 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 PTMAP06454 111 aaKnown RBP15.22■□□□□ 0.03
COL16A1-217ENST00000532877 PAEPP09466 180 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 CCDC172P0C7W6 258 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 POU3F3P20264 500 aaPredicted RBP15.22■□□□□ 0.03
COL16A1-217ENST00000532877 PCSK1P29120 753 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 GNA15P30679 374 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 PRKCIP41743 596 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 GLUD2P49448 558 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 PDE6CP51160 858 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 ERVK-21P61565 698 aa15.22■□□□□ 0.03
COL16A1-217ENST00000532877 PSMC1P62191 440 aaKnown RBP15.22■□□□□ 0.03
COL16A1-217ENST00000532877 MRPL58Q14197 206 aaKnown RBP15.22■□□□□ 0.03
COL16A1-217ENST00000532877 CCDC85BQ15834 202 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms