RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 WT1P19544 449 aaPredicted RBP4.27□□□□□ -1.73
ATM-217ENST00000531957 ITGALP20701 1170 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 HK3P52790 923 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 TMEM119Q4V9L6 283 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 USP45Q70EL2 814 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 PCSK9Q8NBP7 692 aaKnown RBP4.27□□□□□ -1.73
ATM-217ENST00000531957 FAM46DQ8NEK8 389 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 ANKS1AQ92625 1134 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 FKBP10Q96AY3 582 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 AMBRA1Q9C0C7 1298 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 MRPL46Q9H2W6 279 aaKnown RBP4.27□□□□□ -1.73
ATM-217ENST00000531957 SERHLQ9NQF3 203 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 LMBRD1Q9NUN5 540 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 LUC7L2Q9Y383 392 aaKnown RBP4.27□□□□□ -1.73
ATM-217ENST00000531957 RAD54BQ9Y620 910 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 KAT6AQ92794 2004 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 SPATA31A3Q5VYP0 1347 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 DNAJC9-AS1A6NH13 148 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 PPM1DO15297 605 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 GNAI2P04899 355 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 FTH1P19P0C7X4 201 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 TYRP14679 529 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 ZFXP17010 805 aaPredicted RBP4.26□□□□□ -1.73
ATM-217ENST00000531957 DRD4P21917 467 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 PCSK6P29122 969 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 CD6P30203 668 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 CCT8P50990 548 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 ZNF134P52741 427 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 EXOSC9Q06265 439 aaKnown RBP4.26□□□□□ -1.73
ATM-217ENST00000531957 TBCCQ15814 346 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 FAM153CQ494X1 144 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 BRDTQ58F21 947 aaPredicted RBP4.26□□□□□ -1.73
ATM-217ENST00000531957 PPP1R32Q7Z5V6 425 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 USP37Q86T82 979 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 PRR18Q8N4B5 295 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 CPA6Q8N4T0 437 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 CELF5Q8N6W0 485 aaKnown RBP4.26□□□□□ -1.73
ATM-217ENST00000531957 KLHDC4Q8TBB5 520 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 FAM136AQ96C01 138 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 OSBPL9Q96SU4 736 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 C1QTNF7Q9BXJ2 289 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 SLC29A3Q9BZD2 475 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 GTPBP4Q9BZE4 634 aaKnown RBP4.26□□□□□ -1.73
ATM-217ENST00000531957 TTYH3Q9C0H2 523 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 WDCPQ9H6R7 721 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 HOMER2Q9NSB8 354 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.26□□□□□ -1.73
ATM-217ENST00000531957 EHD3Q9NZN3 535 aa4.26□□□□□ -1.73
ATM-217ENST00000531957 AOX1Q06278 1338 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 ARIH2O95376 493 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 HNRNPCP07910 306 aaKnown RBP eCLIP4.25□□□□□ -1.73
ATM-217ENST00000531957 POU2F2P09086 479 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 JUPP14923 745 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 GCLCP48506 637 aaPredicted RBP4.25□□□□□ -1.73
ATM-217ENST00000531957 SP2Q02086 613 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 PGS1Q32NB8 556 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 CCDC157Q569K6 752 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 THEMIS2Q5TEJ8 643 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 FCRLBQ6BAA4 426 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 TMEM108Q6UXF1 575 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 ZBTB46Q86UZ6 589 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 HASPINQ8TF76 798 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 HSPBAP1Q96EW2 488 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 ALG8Q9BVK2 526 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 SERGEFQ9UGK8 458 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 ZDHHC8Q9ULC8 765 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 PADI4Q9UM07 663 aa4.25□□□□□ -1.73
ATM-217ENST00000531957 H3BUI4 141 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 IKBKBO14920 756 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 DCLK1O15075 740 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 SLC16A6O15403 523 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 HDCP19113 662 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 CLCN2P51788 898 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 TFF2Q03403 129 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 PLS1Q14651 629 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 TMEM240Q5SV17 173 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 ZNF782Q6ZMW2 699 aaPredicted RBP4.24□□□□□ -1.73
ATM-217ENST00000531957 C1QL2Q7Z5L3 287 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 FAM109AQ8N4B1 249 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.24□□□□□ -1.73
ATM-217ENST00000531957 SLC46A1Q96NT5 459 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 SIK2Q9H0K1 926 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 PNPOQ9NVS9 261 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 SPEF1Q9Y4P9 236 aa4.24□□□□□ -1.73
ATM-217ENST00000531957 COL3A1P02461 1466 aaPredicted RBP4.24□□□□□ -1.73
ATM-217ENST00000531957 WDR91A4D1P6 747 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 GCOM1H8Y6P7 765 aaPredicted RBP4.23□□□□□ -1.73
ATM-217ENST00000531957 SOAT2O75908 522 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 DNAJB5O75953 348 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 PRKCGP05129 697 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 PIM1P11309 404 aaPredicted RBP4.23□□□□□ -1.73
ATM-217ENST00000531957 ZNF81P51508 661 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 SOX10P56693 466 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 TCF15Q12870 199 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 BMPR2Q13873 1038 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 FAM160B1Q5W0V3 765 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 PTF1AQ7RTS3 328 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 MAVSQ7Z434 540 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 C9orf106Q8NAJ2 232 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 CHMP4CQ96CF2 233 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms