RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TRABD2AQ86V40 505 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 IFNL2Q8IZJ0 200 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 GALNT4Q8N4A0 578 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 GSTCDQ8NEC7 633 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 LILRB4Q8NHJ6 448 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 DDX17Q92841 729 aaKnown RBP8.18□□□□□ -1.1
PTPRK-219ENST00000531050 MED30Q96HR3 178 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TTC25Q96NG3 672 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 TRIM9Q9C026 710 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 KCNK13Q9HB14 408 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 GPR108Q9NPR9 543 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 MRGBPQ9NV56 204 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 NINJ2Q9NZG7 142 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ARMCX1Q9P291 453 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 IGSF9Q9P2J2 1179 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 POU2F3Q9UKI9 436 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 ZBTB21Q9ULJ3 1066 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 PADI4Q9UM07 663 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 PCDHGA3Q9Y5H0 932 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 PCDHGA11Q9Y5H2 935 aa8.18□□□□□ -1.1
PTPRK-219ENST00000531050 CHD4Q14839 1912 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 KRBA1A5PL33 1030 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ERVV-2B6SEH9 535 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 FCHO1O14526 889 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 TBCAO75347 108 aaKnown RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 RSL1D1O76021 490 aaKnown RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 PDE6AP16499 860 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 CIITAP33076 1130 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 PIK3CAP42336 1068 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 IFITM2Q01629 132 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 NR1H3Q13133 447 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 PRKG1Q13976 671 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ARL6IP4Q66PJ3 421 aaKnown RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 KAZNQ674X7 775 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 TTC23LQ6PF05 361 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 TPTE2Q6XPS3 522 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 CPNE9Q8IYJ1 553 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ELMOD1Q8N336 334 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 FANCBQ8NB91 859 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ZNF280CQ8ND82 737 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 HCAR2Q8TDS4 363 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 OTUD5Q96G74 571 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 FBXL18Q96ME1 805 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 C2orf49Q9BVC5 232 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 RNF26Q9BY78 433 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 CDH19Q9H159 772 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 GANQ9H2C0 597 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 PARVGQ9HBI0 331 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 XAB2Q9HCS7 855 aaKnown RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 MOSPD1Q9UJG1 213 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 DNAJC16Q9Y2G8 782 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 NUP188Q5SRE5 1749 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 FRMPD4Q14CM0 1322 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 TJP1Q07157 1748 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 CAPN14A8MX76 684 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ALOX15BO15296 676 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 SLC26A4O43511 780 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 STAM2O75886 525 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 CRTAMO95727 393 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ABCB1P08183 1280 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 H2AFZP0C0S5 128 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ZNF23P17027 643 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ASIC1P78348 528 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ZBTB16Q05516 673 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 CCNIQ14094 377 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 SPCS2Q15005 226 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 TRIM71Q2Q1W2 868 aaKnown RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 EDRF1Q3B7T1 1238 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 OGFRL1Q5TC84 451 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 CCDC137Q6PK04 289 aaKnown RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 H2AFVQ71UI9 128 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 MIER3Q7Z3K6 550 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 MMAAQ8IVH4 418 aaKnown RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 TMEM120AQ9BXJ8 343 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 OSGEPQ9NPF4 335 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 LRRC4BQ9NT99 713 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 CRNNQ9UBG3 495 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ZBTB1Q9Y2K1 713 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 IFT52Q9Y366 437 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
PTPRK-219ENST00000531050 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 FLT1P17948 1338 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 UBR2Q8IWV8 1755 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 C2orf71A6NGG8 1288 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 ADAMTS3O15072 1205 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 SIN3BO75182 1162 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 SNRPA1P09661 255 aaKnown RBP8.16□□□□□ -1.1
PTPRK-219ENST00000531050 SRGAP2CP0DJJ0 459 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 SRGAP2BP0DMP2 458 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 GYS1P13807 737 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 SCNN1DP51172 638 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 PPATQ06203 517 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 DLGAP5Q15398 846 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 GRAMD1BQ3KR37 738 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 LSMEM2Q8N112 164 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 ZNF276Q8N554 614 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 ATP6V0D2Q8N8Y2 350 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 EXD1Q8NHP7 514 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 TBC1D15Q8TC07 691 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms