RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ASH1LQ9NR48 2969 aaKnown RBP8.09□□□□□ -1.11
SVIP-204ENST00000530199 LINC01553A4QN01 128 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 GOLGA6L22H0YM25 854 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 CTAGE5O15320 804 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 B4GALT4O60513 344 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 CAND2O75155 1236 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 MANFP55145 182 aaKnown RBP8.09□□□□□ -1.11
SVIP-204ENST00000530199 PRR5P85299 388 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 DBPQ10586 325 aaPredicted RBP8.09□□□□□ -1.11
SVIP-204ENST00000530199 ITGA7Q13683 1181 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 ACAP2Q15057 778 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
SVIP-204ENST00000530199 GFOD2Q3B7J2 385 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 RPTNQ6XPR3 784 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 CILP2Q8IUL8 1156 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 MB21D1Q8N884 522 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 C8orf58Q8NAV2 365 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 HIPK4Q8NE63 616 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 HSPBAP1Q96EW2 488 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 TEKT5Q96M29 485 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 RIPOR3Q96MK2 946 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 NUP88Q99567 741 aaPredicted RBP8.09□□□□□ -1.11
SVIP-204ENST00000530199 ANO3Q9BYT9 981 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 SIL1Q9H173 461 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 DHX36Q9H2U1 1008 aaKnown RBP8.09□□□□□ -1.11
SVIP-204ENST00000530199 POFUT1Q9H488 388 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 DNAJC18Q9H819 358 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 INVSQ9Y283 1065 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 HCFC2Q9Y5Z7 792 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 MAST4O15021 2626 aa8.09□□□□□ -1.11
SVIP-204ENST00000530199 MROH7-TTC4A0A0A0MT08 1334 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 GRIN2DO15399 1336 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 PTPRSQ13332 1948 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 UBA6A0AVT1 1052 aaPredicted RBP8.08□□□□□ -1.12
SVIP-204ENST00000530199 GJB5O95377 273 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 CLEC2LP0C7M8 214 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 AOAHP28039 575 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 HLTFQ14527 1009 aaKnown RBP eCLIP8.08□□□□□ -1.12
SVIP-204ENST00000530199 COG2Q14746 738 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 RAB3GAP1Q15042 981 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 SHROOM1Q2M3G4 852 aaPredicted RBP8.08□□□□□ -1.12
SVIP-204ENST00000530199 LRRC24Q50LG9 513 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 CT83Q5H943 113 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 TCEAL5Q5H9L2 206 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 TTC38Q5R3I4 469 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 MAMDC4Q6UXC1 1216 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 DEFB128Q7Z7B8 93 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 FOXP4Q8IVH2 680 aaPredicted RBP8.08□□□□□ -1.12
SVIP-204ENST00000530199 KIAA2013Q8IYS2 634 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 LPIN2Q92539 896 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 JADE3Q92613 823 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 E2F7Q96AV8 911 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 RAD9AQ99638 391 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 TRPV6Q9H1D0 765 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 NSUN3Q9H649 340 aaKnown RBP8.08□□□□□ -1.12
SVIP-204ENST00000530199 PCMTD2Q9NV79 361 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 DTLQ9NZJ0 730 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 MTUS1Q9ULD2 1270 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 SPTBN2O15020 2390 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 SIPA1L1O43166 1804 aa8.08□□□□□ -1.12
SVIP-204ENST00000530199 ZNFX1Q9P2E3 1918 aaKnown RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 CDK5RAP2Q96SN8 1893 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 ZRANB2O95218 330 aaKnown RBP eCLIP8.07□□□□□ -1.12
SVIP-204ENST00000530199 SLC25A27O95847 323 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 SNAI1O95863 264 aaPredicted RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 LMNAP02545 664 aaKnown RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 LRG1P02750 347 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 SUPT20HL2P0C7V6 817 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 ICAM3P32942 547 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 AFMP43652 599 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 MAPKAPK2P49137 400 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 MTNR1BP49286 362 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 SRSF2Q01130 221 aaKnown RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 UGT8Q16880 541 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 MAP9Q49MG5 647 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 TOR2AQ5JU69 321 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 ADGRF1Q5T601 910 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 TIGD7Q6NT04 549 aaPredicted RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 G2E3Q7L622 706 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 RPAINQ86UA6 219 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 DZIP1Q86YF9 867 aaKnown RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 MIB1Q86YT6 1006 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 TMEM105Q8N8V8 129 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 SSH1Q8WYL5 1049 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 EAF2Q96CJ1 260 aaPredicted RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 TOE1Q96GM8 510 aaKnown RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 TUBGCP5Q96RT8 1024 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 MYL10Q9BUA6 226 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 STK31Q9BXU1 1019 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 RPAP3Q9H6T3 665 aaPredicted RBP8.07□□□□□ -1.12
SVIP-204ENST00000530199 HSPBP1Q9NZL4 362 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 DENND2AQ9ULE3 1009 aa8.07□□□□□ -1.12
SVIP-204ENST00000530199 PRSS38A1L453 326 aa8.06□□□□□ -1.12
SVIP-204ENST00000530199 GRM8O00222 908 aa8.06□□□□□ -1.12
SVIP-204ENST00000530199 ADCY6O43306 1168 aa8.06□□□□□ -1.12
SVIP-204ENST00000530199 PRPF6O94906 941 aaKnown RBP8.06□□□□□ -1.12
SVIP-204ENST00000530199 IL33O95760 270 aa8.06□□□□□ -1.12
SVIP-204ENST00000530199 PRLP01236 227 aa8.06□□□□□ -1.12
SVIP-204ENST00000530199 KRT18P05783 430 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms