RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TEAD2Q15562 447 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 NFE2Q16621 373 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-216ENST00000528739 SPATA2LQ8IUW3 424 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-216ENST00000528739 GPR152Q8TDT2 470 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 GCNAQ96QF7 691 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 ACBD6Q9BR61 282 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 KCTD10Q9H3F6 313 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 ZFP14Q9HCL3 533 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 AVENQ9NQS1 362 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-216ENST00000528739 RMND1Q9NWS8 449 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 NXF1Q9UBU9 619 aaKnown RBP15.33■□□□□ 0.04
CAPN1-216ENST00000528739 GTF3C4Q9UKN8 822 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 ASB3Q9Y575 518 aa15.33■□□□□ 0.04
CAPN1-216ENST00000528739 SMC2O95347 1197 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 HAPLN1P10915 354 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-216ENST00000528739 RPL13P26373 211 aaKnown RBP15.32■□□□□ 0.04
CAPN1-216ENST00000528739 CCR2P41597 374 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 GPC5P78333 572 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 KCNB1Q14721 858 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 SOWAHAQ2M3V2 549 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 WDR72Q3MJ13 1102 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 ARHGAP15Q53QZ3 475 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 INTS6LQ5JSJ4 861 aaKnown RBP15.32■□□□□ 0.04
CAPN1-216ENST00000528739 PRSS36Q5K4E3 855 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 DPH6Q7L8W6 267 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 OSTM1Q86WC4 334 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 SCN4BQ8IWT1 228 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 FMR1NBQ8N0W7 255 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-216ENST00000528739 OR6B3Q8NGW1 331 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 CXorf38Q8TB03 319 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 ZNF516Q92618 1163 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 MMRN2Q9H8L6 949 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 TMLHEQ9NVH6 421 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 WNT16Q9UBV4 365 aa15.32■□□□□ 0.04
CAPN1-216ENST00000528739 MAGED2Q9UNF1 606 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-216ENST00000528739 BDP1A6H8Y1 2624 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 DENND4AQ7Z401 1863 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 LRRIQ3A6PVS8 624 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-216ENST00000528739 HCRTO43612 131 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 FGF19O95750 216 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 KRT13P13646 458 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 NR2F2P24468 414 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 GABRR2P28476 465 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 GNL1P36915 607 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-216ENST00000528739 AP3M2P53677 418 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 MYL6P60660 151 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 PSMC1P62191 440 aaKnown RBP15.31■□□□□ 0.04
CAPN1-216ENST00000528739 FAM160A1Q05DH4 1040 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 FAM78AQ5JUQ0 283 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 IER5LQ5T953 404 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 ASTLQ6HA08 431 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-216ENST00000528739 TANGO2Q6ICL3 276 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 SLC9A9Q8IVB4 645 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 SMYD4Q8IYR2 804 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-216ENST00000528739 ZSCAN18Q8TBC5 510 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-216ENST00000528739 ERCC4Q92889 916 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-216ENST00000528739 SMARCE1Q969G3 411 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 PSMG2Q969U7 264 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-216ENST00000528739 SYT15Q9BQS2 421 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 DNAJC25Q9H1X3 360 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 HSFX1Q9UBD0 423 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 MYO10Q9HD67 2058 aa15.31■□□□□ 0.04
CAPN1-216ENST00000528739 DPYSL4O14531 572 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 KINO60870 393 aaKnown RBP15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ATP2C2O75185 946 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 MICAL2O94851 1124 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ANK1P16157 1881 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 CYP2F1P24903 491 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 LMO2P25791 158 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ATICP31939 592 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
CAPN1-216ENST00000528739 GPR15P49685 360 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 RPL10AP62906 217 aaKnown RBP15.3■□□□□ 0.04
CAPN1-216ENST00000528739 CYP27A1Q02318 531 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ADAM9Q13443 819 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 SNW1Q13573 536 aaKnown RBP15.3■□□□□ 0.04
CAPN1-216ENST00000528739 GRM2Q14416 872 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 DDR2Q16832 855 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ZNF699Q32M78 642 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 GPR158Q5T848 1215 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 SDHAF4Q5VUM1 108 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ISM2Q6H9L7 571 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 YAF2Q8IY57 180 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 GUF1Q8N442 669 aaKnown RBP15.3■□□□□ 0.04
CAPN1-216ENST00000528739 SHKBP1Q8TBC3 707 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 SPATA18Q8TC71 538 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 PARD3BQ8TEW8 1205 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 SMARCD2Q92925 531 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ZSWIM3Q96MP5 696 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 PRRX2Q99811 253 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 PLA2G2FQ9BZM2 168 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 GPR88Q9GZN0 384 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 ZNF334Q9HCZ1 680 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-216ENST00000528739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.3■□□□□ 0.042e-14■■■■■ 49.7
CAPN1-216ENST00000528739 ARHGEF3Q9NR81 526 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 DMAC2Q9NW81 257 aa15.3■□□□□ 0.04
CAPN1-216ENST00000528739 MAGEC2Q9UBF1 373 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-216ENST00000528739 CDH9Q9ULB4 789 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms