RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 MRPL17Q9NRX2 175 aaKnown RBP14.65□□□□□ -0.06
CD44-224ENST00000526669 FBXL5Q9UKA1 691 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 OBSL1O75147 1896 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 H7C4K7 107 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 ATP2C2O75185 946 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 CILPO75339 1184 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 ACO1P21399 889 aaKnown RBP14.64□□□□□ -0.07
CD44-224ENST00000526669 LHX1P48742 406 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 YWHAEP62258 255 aaKnown RBP14.64□□□□□ -0.07
CD44-224ENST00000526669 GOLGA8FQ08AF8 430 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 GOLGA8DPQ0D2H9 430 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 MRPL58Q14197 206 aaKnown RBP14.64□□□□□ -0.07
CD44-224ENST00000526669 GSE1Q14687 1217 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 DRAP1Q14919 205 aaPredicted RBP14.64□□□□□ -0.07
CD44-224ENST00000526669 TMEM270Q6UE05 265 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 ANKS3Q6ZW76 656 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 CACNA2D4Q7Z3S7 1137 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 ADGRD2Q7Z7M1 963 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 ACOT1Q86TX2 421 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 WHAMMQ8TF30 809 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 NAA15Q9BXJ9 866 aaKnown RBP14.64□□□□□ -0.07
CD44-224ENST00000526669 MTRRQ9UBK8 725 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 BARX2Q9UMQ3 279 aaPredicted RBP14.64□□□□□ -0.07
CD44-224ENST00000526669 CDY1Q9Y6F8 540 aa14.64□□□□□ -0.07
CD44-224ENST00000526669 TMEM265A0A087WTH1 108 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 C2orf71A6NGG8 1288 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 RNF225M0QZC1 329 aaPredicted RBP14.63□□□□□ -0.07
CD44-224ENST00000526669 GABRDO14764 452 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 LILRB3O75022 631 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 OAZ2O95190 189 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 CPB1P15086 417 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 OR1D2P34982 312 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 INCA1Q0VD86 236 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 SLC39A12Q504Y0 691 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 MDH1BQ5I0G3 518 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 ENOSF1Q7L5Y1 443 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 RBBP8NLQ8NC74 664 aaPredicted RBP14.63□□□□□ -0.07
CD44-224ENST00000526669 SPAG5Q96R06 1193 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 CLSTN3Q9BQT9 956 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 GPR88Q9GZN0 384 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 LMAN2LQ9H0V9 348 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 TMLHEQ9NVH6 421 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 CEP72Q9P209 647 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 STK39Q9UEW8 545 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 STXBP5LQ9Y2K9 1186 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 ITIH6Q6UXX5 1313 aa14.63□□□□□ -0.07
CD44-224ENST00000526669 ANAPC1Q9H1A4 1944 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 FOXN3O00409 490 aaPredicted RBP14.62□□□□□ -0.07
CD44-224ENST00000526669 TEX28O15482 410 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 TBC1D4O60343 1298 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 CNPP09543 421 aaKnown RBP14.62□□□□□ -0.07
CD44-224ENST00000526669 RFX1P22670 979 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 PCSK1P29120 753 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 SSTR3P32745 418 aaPredicted RBP14.62□□□□□ -0.07
CD44-224ENST00000526669 RAD23BP54727 409 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 TSPY1Q01534 308 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 ROR1Q01973 937 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 BMS1Q14692 1282 aaKnown RBP14.62□□□□□ -0.07
CD44-224ENST00000526669 INTS6LQ5JSJ4 861 aaKnown RBP14.62□□□□□ -0.07
CD44-224ENST00000526669 SPECC1LQ69YQ0 1117 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 PDXDC1Q6P996 788 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 RBM23Q86U06 439 aaKnown RBP14.62□□□□□ -0.07
CD44-224ENST00000526669 PALB2Q86YC2 1186 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 DRC7Q8IY82 874 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 SLC4A11Q8NBS3 891 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 SPC24Q8NBT2 197 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 SPATA18Q8TC71 538 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 SHC3Q92529 594 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 MRFAP1L1Q96HT8 127 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 FAXDC2Q96IV6 333 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 FAM81BQ96LP2 452 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 PGLYRP2Q96PD5 576 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 KLHL5Q96PQ7 755 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 NT5C1AQ9BXI3 368 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 STK33Q9BYT3 514 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 TTYH3Q9C0H2 523 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 NGRNQ9NPE2 291 aaKnown RBP14.62□□□□□ -0.07
CD44-224ENST00000526669 ACP6Q9NPH0 428 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 CRTAC1Q9NQ79 661 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 FAM49BQ9NUQ9 324 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 CDH9Q9ULB4 789 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 SSX2IPQ9Y2D8 614 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 SZT2Q5T011 3432 aa14.62□□□□□ -0.07
CD44-224ENST00000526669 REV3LO60673 3130 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 WDR27A2RRH5 827 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 MYBPHLA2RUH7 354 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 OR6C75A6NL08 312 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 F8VZ95 297 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 PER2O15055 1255 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 CYP26A1O43174 497 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 GFPT2O94808 682 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 GYPCP04921 128 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 CCDC130P13994 396 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 CD19P15391 556 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 PTPN1P18031 435 aaKnown RBP14.61□□□□□ -0.07
CD44-224ENST00000526669 IGFBP4P22692 258 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 CASP14P31944 242 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 JAM2P57087 298 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 ARID5AQ03989 594 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 PTPROQ16827 1216 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms