RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RAB33AQ14088 237 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 BMS1Q14692 1282 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 MAN2A1Q16706 1144 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 DDR2Q16832 855 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ARHGAP44Q17R89 818 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 MGAT5BQ3V5L5 792 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 VWA3BQ502W6 1294 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 WDR44Q5JSH3 913 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 PDE12Q6L8Q7 609 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 PHLDB3Q6NSJ2 640 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ANKRD54Q6NXT1 300 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 LILRA6Q6PI73 481 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 SYCE2Q6PIF2 218 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 LRSAM1Q6UWE0 723 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GRASPQ7Z6J2 395 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GAS2L3Q86XJ1 694 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 FAM114A1Q8IWE2 563 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 SCN4BQ8IWT1 228 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 HS6ST3Q8IZP7 471 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 THEM5Q8N1Q8 247 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 PPM1KQ8N3J5 372 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 EFHBQ8N7U6 833 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 C12orf29Q8N999 325 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 EHBP1Q8NDI1 1231 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 LMO3Q8TAP4 145 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 WHAMMQ8TF30 809 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 HLA-CQ95604 372 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 PABPC5Q96DU9 382 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 PCMTD1Q96MG8 357 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 NAP1L5Q96NT1 182 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 NECAB3Q96P71 396 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 SEPT5Q99719 369 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 SYT15Q9BQS2 421 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 LSM14BQ9BX40 385 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 IMPG2Q9BZV3 1241 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ZNF518BQ9C0D4 1074 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ELOVL4Q9GZR5 314 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 NIF3L1Q9GZT8 377 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ZCWPW1Q9H0M4 648 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 UBE2TQ9NPD8 197 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 ACP6Q9NPH0 428 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 CRTAC1Q9NQ79 661 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 TMEM30AQ9NV96 361 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GDAP2Q9NXN4 497 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 LMCD1Q9NZU5 365 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 GCNT4Q9P109 453 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 FNIP2Q9P278 1114 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 BACE2Q9Y5Z0 518 aa4.92□□□□□ -1.62
CHMP4A-202ENST00000524955 EYSQ5T1H1 3165 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SZT2Q5T011 3432 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 OR6C75A6NL08 312 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SMTNL1A8MU46 457 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 AP5Z1O43299 807 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 BEST1O76090 585 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 ABLIM3O94929 683 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SERPINC1P01008 464 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 CFHP08603 1231 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 KRT5P13647 590 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 ZNF18P17022 549 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PTPN1P18031 435 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 ATF6P18850 670 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 BDNFP23560 247 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 BRD2P25440 801 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PON1P27169 355 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 ELF1P32519 619 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 UBXN1Q04323 297 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 TWF1Q12792 350 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 CUL2Q13617 745 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 RAPGEF1Q13905 1077 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 KCNC3Q14003 757 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SYCP1Q15431 976 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 EXOC3L4Q17RC7 722 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 CTC1Q2NKJ3 1217 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 INTS6LQ5JSJ4 861 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PPM1LQ5SGD2 360 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SLC8B1Q6J4K2 584 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 TRIM65Q6PJ69 517 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 TMEM270Q6UE05 265 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 GBP6Q6ZN66 633 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 APTXQ7Z2E3 356 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 LIMS2Q7Z4I7 341 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SPATA2LQ8IUW3 424 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 TOP6BLQ8N6T0 577 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 CCDC150Q8NCX0 1101 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 TTC16Q8NEE8 873 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 ZNF461Q8TAF7 563 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 FAM200AQ8TCP9 573 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 ING5Q8WYH8 240 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SMG7Q92540 1137 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 CASP10Q92851 521 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PPP2R3CQ969Q6 453 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 MYLPFQ96A32 169 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 ZNF707Q96C28 371 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PCED1BQ96HM7 432 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 MSLNLQ96KJ4 702 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 HEXIM2Q96MH2 286 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 KREMEN1Q96MU8 473 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 NT5C1BQ96P26 610 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms