RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ACP6Q9NPH0 428 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 MSRAQ9UJ68 235 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 NME7Q9Y5B8 376 aa16.87■□□□□ 0.29
TSPAN4-213ENST00000524895 GBF1Q92538 1859 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 THAP12O43422 761 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 EFEMP2O95967 443 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 CALCAP01258 141 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 SOD2P04179 222 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 PLEKP08567 350 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 FECHP22830 423 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 ACAT1P24752 427 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 DEKP35659 375 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 BMPR1AP36894 532 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 PSMC1P62191 440 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 RTP2Q5QGT7 225 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 TAF3Q5VWG9 929 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 ZNF280DQ6N043 979 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 KIAA1841Q6NSI8 718 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 DDX53Q86TM3 631 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 NOP9Q86U38 636 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 VPS36Q86VN1 386 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 RNF168Q8IYW5 571 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 SLC20A1Q8WUM9 679 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 HEXIM2Q96MH2 286 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 CHP1Q99653 195 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 SYT15Q9BQS2 421 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 PLVAPQ9BX97 442 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 VN1R3Q9BXE9 311 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 ARHGAP20Q9P2F6 1191 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 NOCTQ9UK39 431 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 KIAA1257Q9ULG3 409 aa16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 YBX2Q9Y2T7 364 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-213ENST00000524895 NLRC5Q86WI3 1866 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 H7C4K7 107 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 MED7O43513 233 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 OAZ2O95190 189 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 VDRP11473 427 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 BRD2P25440 801 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 EIF4A3P38919 411 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 PBX2P40425 430 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 GLUD2P49448 558 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 TSPY1Q01534 308 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 PLCB3Q01970 1234 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 CTXN3Q4LDR2 81 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 SGO2Q562F6 1265 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 ANKS3Q6ZW76 656 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 TAS1R1Q7RTX1 841 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 ZNF677Q86XU0 584 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 TMEM139Q8IV31 216 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 KLHL23Q8NBE8 558 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 B3GALNT2Q8NCR0 500 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 CCDC42Q96M95 316 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 SAMD11Q96NU1 681 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 AGPAT1Q99943 283 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 RTP3Q9BQQ7 232 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 ACBD6Q9BR61 282 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 C17orf80Q9BSJ5 609 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 PBX4Q9BYU1 374 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 NHEJ1Q9H9Q4 299 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 SEPT11Q9NVA2 429 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 MTUS1Q9ULD2 1270 aa16.85■□□□□ 0.29
TSPAN4-213ENST00000524895 SSU72P8A0A1W2PR75 194 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 SOWAHDA6NJG2 315 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 ARHGEF15O94989 841 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 URODP06132 367 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 PTPN1P18031 435 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 ANXA13P27216 316 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 CCZ1BP86790 482 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 CCZ1P86791 482 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 CDR2Q01850 454 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 INTS6LQ5JSJ4 861 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 ZNF571Q7Z3V5 609 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 VPS52Q8N1B4 723 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 CRYBG2Q8N1P7 616 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 OR10T2Q8NGX3 314 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 TRIM44Q96DX7 344 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 ZNF830Q96NB3 372 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 TGS1Q96RS0 853 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 KCNF1Q9H3M0 494 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 CHST7Q9NS84 486 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 FAM49BQ9NUQ9 324 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 VWA8A3KMH1 1905 aa16.84■□□□□ 0.29
TSPAN4-213ENST00000524895 OR6C75A6NL08 312 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 C2CD2LO14523 706 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 ARHGAP6O43182 974 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 AKR1B10O60218 316 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 ATP2C2O75185 946 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 MMEP08473 750 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 TNFAIP3P21580 790 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 CYLC1P35663 651 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 TAP1Q03518 808 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 MRPL58Q14197 206 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 STILQ15468 1287 aa16.83■□□□□ 0.28
TSPAN4-213ENST00000524895 PSMD5Q16401 504 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms