RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 M0QZ92 97 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ABLIM1O14639 778 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ACSL3O95573 720 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 P4HA1P13674 534 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 AFF1P51825 1210 aaKnown RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 PTPN11Q06124 597 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 KRT71Q3SY84 523 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 PTPN20Q4JDL3 420 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 NETO2Q8NC67 525 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 MRPL45Q9BRJ2 306 aaKnown RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 KATNBL1Q9H079 304 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 SPC25Q9HBM1 224 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 RASAL2Q9UJF2 1139 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 PCDHA3Q9Y5H8 950 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 C17orf102A2RUQ5 167 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ATP8B1O43520 1251 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 SYF2O95926 243 aaKnown RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ZSCAN5DPP0CG00 497 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 THPOP40225 353 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 ADCY2Q08462 1091 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 GLE1Q53GS7 698 aaKnown RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 PPP6R3Q5H9R7 873 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-216ENST00000524481 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 WDTC1Q8N5D0 677 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 TMEM176AQ96HP8 235 aa12.44□□□□□ -0.42
PTPRK-216ENST00000524481 A0A1B0GUA9 196 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 B4GALT4O60513 344 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 MCF2P10911 925 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 CPT1AP50416 773 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 PEX5P50542 639 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 RAD23BP54727 409 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 PRKCZQ05513 592 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 C15orf59Q2T9L4 293 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-216ENST00000524481 NBPF20Q3BBV1 942 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 EMBQ6PCB8 327 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 MON1BQ7L1V2 547 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 TAX1BP1Q86VP1 789 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 RHOT1Q8IXI2 618 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTPRK-216ENST00000524481 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 RAB17Q9H0T7 212 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 GPATCH2LQ9NWQ4 482 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 TSPAN16Q9UKR8 245 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 NRCAMQ92823 1304 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 MICAL2O94851 1124 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 IL18RAPO95256 599 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 GHRP10912 638 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 ETS1P14921 441 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 CTGFP29279 349 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 HOXA11P31270 313 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-216ENST00000524481 AP3M2P53677 418 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 CLDN10P78369 228 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 CENPCQ03188 943 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 KRT17Q04695 432 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 NNTQ13423 1086 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 FAM76AQ8TAV0 307 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 ERP44Q9BS26 406 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 OSBPL8Q9BZF1 889 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 DPEP3Q9H4B8 488 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 CYTH4Q9UIA0 394 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 PTPRFP10586 1907 aa12.43□□□□□ -0.42
PTPRK-216ENST00000524481 RRN3P2A6NIE6 340 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 MEFVO15553 781 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 PIAS1O75925 651 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 PROSCO94903 275 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 ECEL1O95672 775 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 CCDC130P13994 396 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 LMO2P25791 158 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 NUMBP49757 651 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 OGDHQ02218 1023 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 SNX17Q15036 470 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 C11orf63Q6NUN7 778 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 SLC27A1Q6PCB7 646 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 MFSD7Q6UXD7 560 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 KCTD6Q8NC69 237 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 RAPGEF5Q92565 580 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 FAM81BQ96LP2 452 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 RPS6KC1Q96S38 1066 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 HESX1Q9UBX0 185 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 RBBP6Q7Z6E9 1792 aaKnown RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 E5RJQ4 531 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 AGPSO00116 658 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 ATP2C2O75185 946 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 RPS6KA5O75582 802 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 RNF8O76064 485 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 POMCP01189 267 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 CYP1A1P04798 512 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 ZNF865P0CJ78 1059 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 MMP8P22894 467 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 NRLP54845 237 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 PPP1R26Q5T8A7 1209 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 PIWIL1Q96J94 861 aaKnown RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 GAD1Q99259 594 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 NT5C1AQ9BXI3 368 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 GDF3Q9NR23 364 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 TBK1Q9UHD2 729 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 A6NJR5 290 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms