RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 COL9A3Q14050 684 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 PRAMEF14Q5SWL7 426 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 TRAPPC3LQ5T215 181 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 TMTC4Q5T4D3 741 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 MCTP2Q6DN12 878 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 DCLRE1AQ6PJP8 1040 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 DENND5BQ6ZUT9 1274 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 NUP54Q7Z3B4 507 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 SLC9B2Q86UD5 537 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 UNC45BQ8IWX7 931 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 DCBLD1Q8N8Z6 715 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 PPP1R14CQ8TAE6 165 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 GDAP1Q8TB36 358 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 COX4I2Q96KJ9 171 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 ANP32EQ9BTT0 268 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 CDADC1Q9BWV3 514 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 MRPL46Q9H2W6 279 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 MTG2Q9H4K7 406 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 NOD2Q9HC29 1040 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 GULP1Q9UBP9 304 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 HSF4Q9ULV5 492 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.41□□□□□ -1.7
SKP1-209ENST00000522552 RUSC2Q8N2Y8 1516 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 PYCARD-AS1I3L0S3 204 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 PIK3R2O00459 728 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 SLC27A2O14975 620 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 IPO8O15397 1037 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 DNPH1O43598 174 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 TBX10O75333 385 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 SLC22A3O75751 556 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 SLU7O95391 586 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 F9P00740 461 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 CHGBP05060 677 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 SRGAP2BP0DMP2 458 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 NID1P14543 1247 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 EGR1P18146 543 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 TM4SF1P30408 202 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 EIF2DP41214 584 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 SLC6A9P48067 706 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 RGS3P49796 1198 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 UBXN2AP68543 259 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 TEKQ02763 1124 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 EXOSC9Q06265 439 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 SEMA3AQ14563 771 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 KCNB1Q14721 858 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 COG2Q14746 738 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 ANKRD1Q15327 319 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 CHRNA2Q15822 529 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 ADIPOQQ15848 244 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 MAPKAPK3Q16644 382 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 KYNUQ16719 465 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 ZNF674Q2M3X9 581 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 BMP2KLQ5H9B9 411 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 INTS5Q6P9B9 1019 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 KLHL24Q6TFL4 600 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 ATF7IPQ6VMQ6 1270 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 KIAA0408Q6ZU52 694 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 DMRTC2Q8IXT2 367 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 LRRC71Q8N4P6 559 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 C12orf50Q8NA57 414 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 SPC24Q8NBT2 197 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 LINC00116Q8NCU8 138 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 HIPK4Q8NE63 616 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 IFI44Q8TCB0 444 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 UTP15Q8TED0 518 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 SH3RF3Q8TEJ3 882 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 FNIP1Q8TF40 1166 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 HOXB13Q92826 284 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 METTL22Q9BUU2 404 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 ZNF518BQ9C0D4 1074 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 RNF208Q9H0X6 261 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 NDST4Q9H3R1 872 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 CHMP4BQ9H444 224 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 CHODLQ9H9P2 273 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 G6PC2Q9NQR9 355 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 DECR2Q9NUI1 292 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 NOP53Q9NZM5 478 aaKnown RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 AJAP1Q9UKB5 411 aaPredicted RBP4.41□□□□□ -1.7
SKP1-209ENST00000522552 TCFL5Q9UL49 500 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 DAPP1Q9UN19 280 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 CAMK2AQ9UQM7 478 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 DNAJC16Q9Y2G8 782 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 MED16Q9Y2X0 877 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 ASB1Q9Y576 335 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 PCDHB6Q9Y5E3 794 aa4.41□□□□□ -1.7
SKP1-209ENST00000522552 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 PRAMEF22A3QJZ6 481 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 PLOD2O00469 737 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 KCNQ3O43525 872 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 TSPAN3O60637 253 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 FMO6PO60774 539 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 PPP1R11O60927 126 aaPredicted RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 FKTNO75072 461 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 GUCA1CO95843 209 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 ABHD16AO95870 558 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 AFPP02771 609 aaKnown RBP4.4□□□□□ -1.71
SKP1-209ENST00000522552 FTH1P19P0C7X4 201 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 IFNAR1P17181 557 aa4.4□□□□□ -1.71
SKP1-209ENST00000522552 RAB6AP20340 208 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms