RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 NEK11Q8NG66 645 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 KBTBD7Q8WVZ9 684 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 BAP1Q92560 729 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 RXFP1Q9HBX9 757 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 CEP72Q9P209 647 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 MTRRQ9UBK8 725 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 DNAJC12Q9UKB3 198 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 L1RE1Q9UN81 338 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 CDY1Q9Y6F8 540 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 MYH10P35580 1976 aa16.38■□□□□ 0.21
LSM1-203ENST00000520755 MTCL1Q9Y4B5 1905 aaKnown RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 CLASP2O75122 1294 aaKnown RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 CYP11A1P05108 521 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 ADH1AP07327 375 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 PNMA6AP0CW24 399 aaPredicted RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 ACO1P21399 889 aaKnown RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 NDUFV1P49821 464 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 CDH8P55286 799 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 ARPP19P56211 112 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 MRPL58Q14197 206 aaKnown RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 SKIV2LQ15477 1246 aaKnown RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 DUSP6Q16828 381 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 SOWAHAQ2M3V2 549 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 LLGL2Q6P1M3 1020 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 RSPO2Q6UXX9 243 aaPredicted RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 OSTM1Q86WC4 334 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 ADGRF2Q8IZF7 708 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 TOP6BLQ8N6T0 577 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 MAFAQ8NHW3 353 aaPredicted RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 CLSTN3Q9BQT9 956 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 UBE2TQ9NPD8 197 aaPredicted RBP16.37■□□□□ 0.21
LSM1-203ENST00000520755 NLRC4Q9NPP4 1024 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 FNIP2Q9P278 1114 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 HMGXB4Q9UGU5 601 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 STXBP5LQ9Y2K9 1186 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 BACE2Q9Y5Z0 518 aa16.37■□□□□ 0.21
LSM1-203ENST00000520755 ADAM12O43184 909 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 HCRTO43612 131 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 OAZ2O95190 189 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 WEE2P0C1S8 567 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 TRIM21P19474 475 aaKnown RBP16.36■□□□□ 0.21
LSM1-203ENST00000520755 RFX1P22670 979 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 TBXAS1P24557 533 aaPredicted RBP16.36■□□□□ 0.21
LSM1-203ENST00000520755 OR1D2P34982 312 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 GOLGA8FQ08AF8 430 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 GOLGA8DPQ0D2H9 430 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
LSM1-203ENST00000520755 EP400NLQ6ZTU2 488 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 PALB2Q86YC2 1186 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 THEM5Q8N1Q8 247 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 TMEM86AQ8N2M4 240 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 SHC3Q92529 594 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 FAXDC2Q96IV6 333 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 PDLIM2Q96JY6 352 aa16.36■□□□□ 0.21
LSM1-203ENST00000520755 MRPL45Q9BRJ2 306 aaKnown RBP16.36■□□□□ 0.21
LSM1-203ENST00000520755 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 F8VZ95 297 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 LINC01565O15544 149 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 P4HA1P13674 534 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 CASP14P31944 242 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 RBM10P98175 930 aaKnown RBP16.35■□□□□ 0.21
LSM1-203ENST00000520755 INCA1Q0VD86 236 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 RAPGEF1Q13905 1077 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 DRAP1Q14919 205 aaPredicted RBP16.35■□□□□ 0.21
LSM1-203ENST00000520755 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 DPH6Q7L8W6 267 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 PPFIBP1Q86W92 1011 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 GPIHBP1Q8IV16 184 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 SPC24Q8NBT2 197 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 WHAMMQ8TF30 809 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 TWNKQ96RR1 684 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 CDCA3Q99618 268 aaPredicted RBP16.35■□□□□ 0.21
LSM1-203ENST00000520755 NUP58Q9BVL2 599 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 DDX43Q9NXZ2 648 aaKnown RBP16.35■□□□□ 0.21
LSM1-203ENST00000520755 CLDND1Q9NY35 253 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 DAAM1Q9Y4D1 1078 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 HCFC2Q9Y5Z7 792 aa16.35■□□□□ 0.21
LSM1-203ENST00000520755 OR6C75A6NL08 312 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 TBC1D4O60343 1298 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 TACC1O75410 805 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 OR4Q2P0C623 313 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 SPATA31D3P0C874 917 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 CPB1P15086 417 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 EPCAMP16422 314 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 CD58P19256 250 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 ACAT1P24752 427 aaKnown RBP16.34■□□□□ 0.21
LSM1-203ENST00000520755 CLCN4P51793 760 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 ZNF132P52740 706 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 TRIM14Q14142 442 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 SPATA31D4Q6ZUB0 917 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 ENOSF1Q7L5Y1 443 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 EFHBQ8N7U6 833 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 VN1R2Q8NFZ6 395 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 OR10T2Q8NGX3 314 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 TMEM209Q96SK2 561 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 RTP3Q9BQQ7 232 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 STK33Q9BYT3 514 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 SNX25Q9H3E2 840 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 CYP3A43Q9HB55 503 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms