RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 RMDN1Q96DB5 314 aa16.36■□□□□ 0.21
CSMD1-207ENST00000520451 MSANTD3Q96H12 275 aa16.36■□□□□ 0.21
CSMD1-207ENST00000520451 LRRC3BQ96PB8 259 aa16.36■□□□□ 0.21
CSMD1-207ENST00000520451 USP28Q96RU2 1077 aa16.36■□□□□ 0.21
CSMD1-207ENST00000520451 FAM126AQ9BYI3 521 aaPredicted RBP16.36■□□□□ 0.21
CSMD1-207ENST00000520451 C8orf33Q9H7E9 229 aaPredicted RBP16.36■□□□□ 0.21
CSMD1-207ENST00000520451 OLFML3Q9NRN5 406 aa16.36■□□□□ 0.21
CSMD1-207ENST00000520451 RBAKQ9NYW8 714 aaPredicted RBP16.36■□□□□ 0.21
CSMD1-207ENST00000520451 SMG5Q9UPR3 1016 aaKnown RBP16.36■□□□□ 0.21
CSMD1-207ENST00000520451 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
CSMD1-207ENST00000520451 A0A087X0B3 334 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 PRAMEF12O95522 483 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 HAPLN1P10915 354 aaPredicted RBP16.35■□□□□ 0.21
CSMD1-207ENST00000520451 CHRNB1P11230 501 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 POLR2BP30876 1174 aaKnown RBP16.35■□□□□ 0.21
CSMD1-207ENST00000520451 CCR3P51677 355 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 MLLT6P55198 1093 aaPredicted RBP16.35■□□□□ 0.21
CSMD1-207ENST00000520451 TSPY1Q01534 308 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 PPP2R5DQ14738 602 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 SLC39A14Q15043 492 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 ARHGAP29Q52LW3 1261 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 C1orf228Q6PIY5 440 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 TTC8Q8TAM2 541 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 NOC3LQ8WTT2 800 aaKnown RBP16.35■□□□□ 0.21
CSMD1-207ENST00000520451 ZFYVE19Q96K21 471 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 FGFBP2Q9BYJ0 223 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 EPC1Q9H2F5 836 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 TASP1Q9H6P5 420 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 IL21Q9HBE4 155 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 PANK4Q9NVE7 773 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 OBP2AQ9NY56 170 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 AGAP1Q9UPQ3 857 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 MTMR6Q9Y217 621 aa16.35■□□□□ 0.21
CSMD1-207ENST00000520451 FRMD3A2A2Y4 597 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 GOLGA8IPA6NC78 632 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 GOLGA8JA6NMD2 632 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 LDHAP00338 332 aaKnown RBP16.34■□□□□ 0.21
CSMD1-207ENST00000520451 ITGB3P05106 788 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 TDGF1P13385 188 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 GARTP22102 1010 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 NRLP54845 237 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 ALCAMQ13740 583 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 LRRC32Q14392 662 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 MAMSTRQ6ZN01 415 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 PDILTQ8N807 584 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 C1orf127Q8N9H9 656 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 BPIFB1Q8TDL5 484 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 CACTINQ8WUQ7 758 aaKnown RBP16.34■□□□□ 0.21
CSMD1-207ENST00000520451 SECISBP2LQ93073 1101 aaKnown RBP16.34■□□□□ 0.21
CSMD1-207ENST00000520451 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
CSMD1-207ENST00000520451 CBWD1Q9BRT8 395 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 SMG9Q9H0W8 520 aaKnown RBP16.34■□□□□ 0.21
CSMD1-207ENST00000520451 RBM12Q9NTZ6 932 aaKnown RBP16.34■□□□□ 0.21
CSMD1-207ENST00000520451 TMLHEQ9NVH6 421 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 GTSE1Q9NYZ3 720 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 PCDHB5Q9Y5E4 795 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 MORC2Q9Y6X9 1032 aaPredicted RBP16.34■□□□□ 0.21
CSMD1-207ENST00000520451 CACNA1AO00555 2505 aa16.34■□□□□ 0.21
CSMD1-207ENST00000520451 DNAH14Q0VDD8 3507 aa16.33■□□□□ 0.21
CSMD1-207ENST00000520451 MYBPHLA2RUH7 354 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 SPECC1L-ADORA2AF8WAN1 911 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 EXTL3O43909 919 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 HUS1O60921 280 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 PRPF6O94906 941 aaKnown RBP16.33■□□□□ 0.2
CSMD1-207ENST00000520451 WEE1P30291 646 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 CTHP32929 405 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 SATB1Q01826 763 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 BFSP1Q12934 665 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 TXNDC11Q6PKC3 985 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 PDCL2Q8N4E4 241 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 CSGALNACT2Q8N6G5 542 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 FAM84AQ96KN4 292 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 SLC46A2Q9BY10 475 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.2
CSMD1-207ENST00000520451 PCIF1Q9H4Z3 704 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 ITGA11Q9UKX5 1188 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 L1RE1Q9UN81 338 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 TCHHQ07283 1943 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 CEP250Q9BV73 2442 aa16.33■□□□□ 0.2
CSMD1-207ENST00000520451 STX6O43752 255 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 PRPF40AO75400 957 aaKnown RBP16.32■□□□□ 0.2
CSMD1-207ENST00000520451 KRT19P08727 400 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 CXCL12P48061 93 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 GPR15P49685 360 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 PLCB2Q00722 1185 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 TNK2Q07912 1038 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 GAS6Q14393 721 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 STK38Q15208 465 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 NFE2Q16621 373 aaPredicted RBP16.32■□□□□ 0.2
CSMD1-207ENST00000520451 DGLUCYQ7Z3D6 616 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 RALGPS2Q86X27 583 aaPredicted RBP16.32■□□□□ 0.2
CSMD1-207ENST00000520451 CCDC65Q8IXS2 484 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 SPEM1Q8N4L4 309 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 LRRC52Q8N7C0 313 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 NUP210Q8TEM1 1887 aaPredicted RBP16.32■□□□□ 0.2
CSMD1-207ENST00000520451 MTMR12Q9C0I1 747 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 TMEM206Q9H813 350 aa16.32■□□□□ 0.2
CSMD1-207ENST00000520451 PDE11AQ9HCR9 933 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms