RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 KRT5P13647 590 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 SOX5P35711 763 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 FXR1P51114 621 aaKnown RBP eCLIP18.98■□□□□ 0.63
SDC2-205ENST00000520233 ZNF132P52740 706 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 RAD23BP54727 409 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 ERVFC1P60507 584 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 CREMQ03060 361 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 PSMD5Q16401 504 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 CTXN3Q4LDR2 81 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 PDE12Q6L8Q7 609 aaKnown RBP18.98■□□□□ 0.63
SDC2-205ENST00000520233 TMC7Q7Z402 723 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 FMNL3Q8IVF7 1028 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 CRYBG2Q8N1P7 616 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 RBBP8NLQ8NC74 664 aaPredicted RBP18.98■□□□□ 0.63
SDC2-205ENST00000520233 TMEM176AQ96HP8 235 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 TNIP3Q96KP6 325 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 TWNKQ96RR1 684 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 TCF25Q9BQ70 676 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 ELOVL4Q9GZR5 314 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 NUCKS1Q9H1E3 243 aaKnown RBP18.98■□□□□ 0.63
SDC2-205ENST00000520233 ZNF576Q9H609 170 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 NGRNQ9NPE2 291 aaKnown RBP18.98■□□□□ 0.63
SDC2-205ENST00000520233 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.98■□□□□ 0.63
SDC2-205ENST00000520233 IMPACTQ9P2X3 320 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 HMGXB4Q9UGU5 601 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 IRAK3Q9Y616 596 aa18.98■□□□□ 0.63
SDC2-205ENST00000520233 PLXNA4Q9HCM2 1894 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 LRRC53A6NM62 1247 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 C2CD2LO14523 706 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 FSCN2O14926 492 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 HCRTO43612 131 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 LILRB3O75022 631 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 PAEPP09466 180 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 USP8P40818 1118 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 CAMK1Q14012 370 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 SMC1AQ14683 1233 aaKnown RBP18.97■□□□□ 0.63
SDC2-205ENST00000520233 PTPN14Q15678 1187 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 ZNF394Q53GI3 561 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 SLC4A11Q8NBS3 891 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 OR10T2Q8NGX3 314 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 SYT15Q9BQS2 421 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 RXFP1Q9HBX9 757 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 ENTPD7Q9NQZ7 604 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 FNIP2Q9P278 1114 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 VWA8A3KMH1 1905 aa18.97■□□□□ 0.63
SDC2-205ENST00000520233 EPOPA6NHQ4 379 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 CXCL14O95715 111 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 PNMA6AP0CW24 399 aaPredicted RBP18.96■□□□□ 0.63
SDC2-205ENST00000520233 PTPN1P18031 435 aaKnown RBP18.96■□□□□ 0.63
SDC2-205ENST00000520233 ACAT1P24752 427 aaKnown RBP18.96■□□□□ 0.63
SDC2-205ENST00000520233 KRT9P35527 623 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 BPIFB4P59827 614 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 TSPY1Q01534 308 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 INTS6LQ5JSJ4 861 aaKnown RBP18.96■□□□□ 0.63
SDC2-205ENST00000520233 ACOT1Q86TX2 421 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 GDPD5Q8WTR4 605 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 AUTS2Q8WXX7 1259 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 ZCWPW1Q9H0M4 648 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 DPEP3Q9H4B8 488 aa18.96■□□□□ 0.63
SDC2-205ENST00000520233 AKR1B15C9JRZ8 316 aaPredicted RBP18.95■□□□□ 0.62
SDC2-205ENST00000520233 SOX1O00570 391 aaPredicted RBP18.95■□□□□ 0.62
SDC2-205ENST00000520233 CYP26A1O43174 497 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 MFAP3LO75121 409 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 ATP2C2O75185 946 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 GFPT2O94808 682 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 CCDC172P0C7W6 258 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 FERP16591 822 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 CLCN1P35523 988 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 ORC1Q13415 861 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 ARID5BQ14865 1188 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 SFMBT2Q5VUG0 894 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 SLC8B1Q6J4K2 584 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 RSPO2Q6UXX9 243 aaPredicted RBP18.95■□□□□ 0.62
SDC2-205ENST00000520233 CNGA4Q8IV77 575 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 DCP1BQ8IZD4 617 aaKnown RBP18.95■□□□□ 0.62
SDC2-205ENST00000520233 MRPL43Q8N983 215 aaKnown RBP18.95■□□□□ 0.62
SDC2-205ENST00000520233 SPC24Q8NBT2 197 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 B3GALNT2Q8NCR0 500 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 MICAL1Q8TDZ2 1067 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 SYN2Q92777 582 aaPredicted RBP18.95■□□□□ 0.62
SDC2-205ENST00000520233 TMEM209Q96SK2 561 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 PKMYT1Q99640 499 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 CLSTN3Q9BQT9 956 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 AIPL1Q9NZN9 384 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 KIAA1257Q9ULG3 409 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 CDY1Q9Y6F8 540 aa18.95■□□□□ 0.62
SDC2-205ENST00000520233 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.94■□□□□ 0.62
SDC2-205ENST00000520233 GOLGA6L6A8MZA4 724 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 LPXNO60711 386 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 VDRP11473 427 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 CA8P35219 290 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 IRS1P35568 1242 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 PSMC1P62191 440 aaKnown RBP18.94■□□□□ 0.62
SDC2-205ENST00000520233 PTK2Q05397 1052 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 MAPRE1Q15691 268 aaKnown RBP18.94■□□□□ 0.62
SDC2-205ENST00000520233 PLPP4Q5VZY2 271 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 FAM171BQ6P995 826 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 OR8K1Q8NGG5 319 aa18.94■□□□□ 0.62
SDC2-205ENST00000520233 HEXIM2Q96MH2 286 aaKnown RBP18.94■□□□□ 0.62
SDC2-205ENST00000520233 DNAJC7Q99615 494 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms