RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SLC17A7Q9P2U7 560 aa14.24□□□□□ -0.13
PABPC1-208ENST00000519004 MAD2L2Q9UI95 211 aa14.24□□□□□ -0.13
PABPC1-208ENST00000519004 GPC6Q9Y625 555 aaPredicted RBP14.24□□□□□ -0.13
PABPC1-208ENST00000519004 TNS3Q68CZ2 1445 aa14.24□□□□□ -0.13
PABPC1-208ENST00000519004 FAM237BA0A1B0GVD1 139 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 GTPBP10A4D1E9 387 aaKnown RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 XPOTO43592 962 aaKnown RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 RBP3P10745 1247 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 SLC5A1P13866 664 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 CPOXP36551 454 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 ORC2Q13416 577 aaPredicted RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 GK3PQ14409 553 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 GRAMD1BQ3KR37 738 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 HSF5Q4G112 596 aaPredicted RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 OGFRL1Q5TC84 451 aaPredicted RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 IZUMO3Q5VZ72 239 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 IFNL2Q8IZJ0 200 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 MORC4Q8TE76 937 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 LRRC4BQ9NT99 713 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 DNAJC12Q9UKB3 198 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 APPL1Q9UKG1 709 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 DTNAQ9Y4J8 743 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 SPOPO43791 374 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 C6orf222P0C671 652 aaPredicted RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 CDK9P50750 372 aaKnown RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 DYNLL1P63167 89 aaKnown RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 MECOMQ03112 1051 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 TRIM28Q13263 835 aaKnown RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 GRM4Q14833 912 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 CHRNA2Q15822 529 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 TMEM214Q6NUQ4 689 aaKnown RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 DCDC5Q6ZRR9 648 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 ANKS1BQ7Z6G8 1248 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 POU5F2Q8N7G0 328 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 RAPGEF4Q8WZA2 1011 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 CLIP3Q96DZ5 547 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 MRRFQ96E11 262 aaKnown RBP14.23□□□□□ -0.13
PABPC1-208ENST00000519004 DCAF5Q96JK2 942 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 BTBD6Q96KE9 485 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 C1orf21Q9H246 121 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 SAYSD1Q9NPB0 183 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 SLC38A7Q9NVC3 462 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 INPP5FQ9Y2H2 1132 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 GIT1Q9Y2X7 761 aa14.23□□□□□ -0.13
PABPC1-208ENST00000519004 E5RJQ4 531 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 GCP02774 474 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 FTLP02792 175 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 S100A1P23297 94 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 IL6STP40189 918 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 CASP4P49662 377 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 CTSWP56202 376 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 ZNF200P98182 395 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 MTMR2Q13614 643 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 INAQ16352 499 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 ZCCHC9Q8N567 271 aaKnown RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 DCUN1D1Q96GG9 259 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 HERPUD2Q9BSE4 406 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 DCLK3Q9C098 648 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 GBA3Q9H227 469 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 ARMC7Q9H6L4 198 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 IL17RBQ9NRM6 502 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 SLAIN2Q9P270 581 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 PSMC3IPQ9P2W1 217 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 CCPG1Q9ULG6 757 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 POLIQ9UNA4 740 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 TIMM22Q9Y584 194 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 SPATA31A1Q5TZJ5 1347 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 CICQ96RK0 1608 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 MEI4A8MW99 385 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 POTECB2RU33 542 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 USP17L12C9JPN9 530 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 USP17L21D6R901 530 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 MTA2O94776 668 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 OCM2P0CE71 109 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 OCMP0CE72 109 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 RAG1P15918 1043 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 MAN1A1P33908 653 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 HOXD13P35453 343 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 GPC5P78333 572 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 HIC1Q14526 733 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 FASTKD3Q14CZ7 662 aaKnown RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 EFTUD2Q15029 972 aaKnown RBP eCLIP14.22□□□□□ -0.137e-11■■■□□ 17.5
PABPC1-208ENST00000519004 SEPT7Q16181 437 aaKnown RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 C6orf183Q5T699 404 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 IYDQ6PHW0 289 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 ANO5Q75V66 913 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 SLC20A1Q8WUM9 679 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 STARD8Q92502 1023 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 BMP2KQ9NSY1 1161 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-208ENST00000519004 TMOD2Q9NZR1 351 aa14.22□□□□□ -0.13
PABPC1-208ENST00000519004 H3BNX3 289 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 TM9SF1O15321 606 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 EDIL3O43854 480 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 CCNT2O60583 730 aaKnown RBP14.21□□□□□ -0.13
PABPC1-208ENST00000519004 SORBS2O94875 1100 aaKnown RBP14.21□□□□□ -0.13
PABPC1-208ENST00000519004 CRTAMO95727 393 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 THRAP10827 490 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 EEF2P13639 858 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms