RNA–Protein interactions for RNA: ENST00000518096.1

TUBBP1-202, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,646 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-202ENST00000518096 LINC01553A4QN01 128 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 CARNS1A5YM72 827 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 GABRDO14764 452 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 SYN3O14994 580 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 THAP12O43422 761 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 NRDCO43847 1150 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 ATP2C2O75185 946 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 LINC00271P0C7V0 271 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 CYP11B1P15538 503 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 TYMPP19971 482 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 BRD2P25440 801 aaKnown RBP11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 PRKCIP41743 596 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 PDE6CP51160 858 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 CDK17Q00537 523 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 YWHAHQ04917 246 aaPredicted RBP11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 ZNF571Q7Z3V5 609 aaPredicted RBP11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 NOP9Q86U38 636 aaKnown RBP11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 TMEM139Q8IV31 216 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 THEM5Q8N1Q8 247 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 C12orf29Q8N999 325 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 CCDC112Q8NEF3 446 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 EPS8L1Q8TE68 723 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 VN1R3Q9BXE9 311 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 KCNF1Q9H3M0 494 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 DEF6Q9H4E7 631 aa11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 NHEJ1Q9H9Q4 299 aaPredicted RBP11.42□□□□□ -0.58
TUBBP1-202ENST00000518096 VWA8A3KMH1 1905 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 SOWAHDA6NJG2 315 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 FGF18O76093 207 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 CA3P07451 260 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 PAEPP09466 180 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 TNFAIP3P21580 790 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 FGFR3P22607 806 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 FECHP22830 423 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 CTNNB1P35222 781 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 PPM1AP35813 382 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 BMPR1AP36894 532 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 PBX2P40425 430 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 CDR1P51861 262 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 PSMC1P62191 440 aaKnown RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 CCZ1BP86790 482 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 CCZ1P86791 482 aaPredicted RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 KRT17Q04695 432 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 MTF1Q14872 753 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 USP41Q3LFD5 358 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 KIAA0319Q5VV43 1072 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 SPRED2Q7Z698 418 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 CRYBG2Q8N1P7 616 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 KLHL23Q8NBE8 558 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 ZNF606Q8WXB4 792 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 TFAP2BQ92481 460 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 TRIM44Q96DX7 344 aaPredicted RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 CCDC42Q96M95 316 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 AGPAT1Q99943 283 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 RTP3Q9BQQ7 232 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 C17orf80Q9BSJ5 609 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 DNAI2Q9GZS0 605 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 SEPT11Q9NVA2 429 aaKnown RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 NOCTQ9UK39 431 aaKnown RBP11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 MTUS1Q9ULD2 1270 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 PCDHA11Q9Y5I1 949 aa11.41□□□□□ -0.58
TUBBP1-202ENST00000518096 TSC2P49815 1807 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 FAM170AA1A519 330 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 OAZ2O95190 189 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 EFEMP2O95967 443 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 MMEP08473 750 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 VDRP11473 427 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 CHRNB2P17787 502 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 PTPN1P18031 435 aaKnown RBP11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 PCSK1P29120 753 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 CTXN3Q4LDR2 81 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 SGO2Q562F6 1265 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 RTP2Q5QGT7 225 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 SMYD5Q6GMV2 418 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 KIAA1841Q6NSI8 718 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 RAD9BQ6WBX8 426 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 DDX53Q86TM3 631 aaKnown RBP11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 GLYCTKQ8IVS8 523 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 B3GALNT2Q8NCR0 500 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 SPATA18Q8TC71 538 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 RIN2Q8WYP3 895 aaPredicted RBP11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 DDX1Q92499 740 aaKnown RBP11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 TNIP3Q96KP6 325 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 TMEM209Q96SK2 561 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 SYT15Q9BQS2 421 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 ZSWIM1Q9BR11 485 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 ACBD6Q9BR61 282 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 PDCL3Q9H2J4 239 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 FAM49BQ9NUQ9 324 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 CDH9Q9ULB4 789 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 KIAA1257Q9ULG3 409 aa11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 YBX2Q9Y2T7 364 aaKnown RBP11.4□□□□□ -0.58
TUBBP1-202ENST00000518096 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms