RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CCHCR1Q8TD31 782 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 PIGOQ8TEQ8 1089 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 CFHR4Q92496 578 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 KCNN1Q92952 543 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 TSGA13Q96PP4 275 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 UIMC1Q96RL1 719 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 RNF208Q9H0X6 261 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 MTG2Q9H4K7 406 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 MANSC1Q9H8J5 431 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ERVMER34-1Q9H9K5 563 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 PDE7BQ9NP56 450 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLAMF7Q9NQ25 335 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 HPF1Q9NWY4 346 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 HCSTQ9UBK5 93 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 TCFL5Q9UL49 500 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ATP6V0A2Q9Y487 856 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 PCDHB6Q9Y5E3 794 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 LYVE1Q9Y5Y7 322 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ATAD2BQ9ULI0 1458 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 A0A087WZ62 844 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 CDC14CA4D256 554 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 STX16-NPEPL1H3BU86 382 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 STX16O14662 325 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 TSPAN3O60637 253 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 FMO6PO60774 539 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 DEAF1O75398 565 aaPredicted RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 CLEC3BP05452 202 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 P4HA1P13674 534 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 IFNAR1P17181 557 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 EGR1P18146 543 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 HLA-DPA1P20036 260 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 IL1R2P27930 398 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 EEF1DP29692 281 aaKnown RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 PRDX5P30044 214 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 THPOP40225 353 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 RGS2P41220 211 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 KIR3DL1P43629 444 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 HARS2P49590 506 aaKnown RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 RBM5P52756 815 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 RCAN1P53805 252 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 EPHA5P54756 1037 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 ALDH18A1P54886 795 aaKnown RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 TLE1Q04724 770 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 GRIN1Q05586 938 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 TNK2Q07912 1038 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 FSTL1Q12841 308 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 RAB32Q13637 225 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 RPS6KA2Q15349 733 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 ADIPOQQ15848 244 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 NFIL3Q16649 462 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 KYNUQ16719 465 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZNF827Q17R98 1081 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZNF674Q2M3X9 581 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 STEAP3Q658P3 488 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 FDX2Q6P4F2 183 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 INTS5Q6P9B9 1019 aaKnown RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZPBP2Q6X784 338 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 CCDC73Q6ZRK6 1079 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 KIAA0408Q6ZU52 694 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 ACAD11Q709F0 780 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 NUP54Q7Z3B4 507 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 GPR149Q86SP6 731 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 YAF2Q8IY57 180 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 THNSL1Q8IYQ7 743 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 LRRC71Q8N4P6 559 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 CDYL2Q8N8U2 506 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 LINC00116Q8NCU8 138 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 OR56A3Q8NH54 315 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 PLEKHO2Q8TD55 490 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 CLEC4DQ8WXI8 215 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 KRT35Q92764 455 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 COX4I2Q96KJ9 171 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 GBP5Q96PP8 586 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 PSMG3-AS1Q96PY0 264 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 FDXACB1Q9BRP7 624 aaPredicted RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 DPH1Q9BZG8 443 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 MMADHCQ9H3L0 296 aaPredicted RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 SMARCAD1Q9H4L7 1026 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 COPS7BQ9H9Q2 264 aaPredicted RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 BRF2Q9HAW0 419 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 A1CFQ9NQ94 594 aaKnown RBP4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 DECR2Q9NUI1 292 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 UCKL1Q9NWZ5 548 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 MORF4L1Q9UBU8 362 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 MID2Q9UJV3 735 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 DAPP1Q9UN19 280 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 HDAC5Q9UQL6 1122 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 DNAJC16Q9Y2G8 782 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 ASB1Q9Y576 335 aa4.31□□□□□ -1.72
RNU4-60P-201ENST00000517239 A0A1W2PQ09 198 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 ARHGAP10A1A4S6 786 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 VWA3AA6NCI4 1184 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 BTBD11A6QL63 1104 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 M0R082 166 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 F2RL2O00254 374 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 PLOD2O00469 737 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 NDC80O14777 642 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 PSMA7O14818 248 aa4.3□□□□□ -1.72
RNU4-60P-201ENST00000517239 OPHN1O60890 802 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms