RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 SEMA4CQ9C0C4 833 aa3.84□□□□□ -1.79
RNU4-49P-201ENST00000516080 SMOC2Q9H3U7 446 aa3.84□□□□□ -1.79
RNU4-49P-201ENST00000516080 ZDHHC8Q9ULC8 765 aa3.84□□□□□ -1.79
RNU4-49P-201ENST00000516080 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.84□□□□□ -1.79
RNU4-49P-201ENST00000516080 SPEF1Q9Y4P9 236 aa3.84□□□□□ -1.79
RNU4-49P-201ENST00000516080 RAD54BQ9Y620 910 aa3.84□□□□□ -1.79
RNU4-49P-201ENST00000516080 CACNA1IQ9P0X4 2223 aa3.84□□□□□ -1.79
RNU4-49P-201ENST00000516080 PRSS29PA6NIE9 313 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 TARM1B6A8C7 271 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 HNRNPCP07910 306 aaKnown RBP eCLIP3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 FAM163BP0C2L3 166 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 EBLN1P0CF75 366 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 NDUFB7P17568 137 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 ZNF618Q5T7W0 954 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 CEP85Q6P2H3 762 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 FAM90A1Q86YD7 464 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 ZNF778Q96MU6 729 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 TINAGL1Q9GZM7 467 aaPredicted RBP3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 SLAMF7Q9NQ25 335 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 ARHGEF3Q9NR81 526 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 PCDHA3Q9Y5H8 950 aa3.83□□□□□ -1.8
RNU4-49P-201ENST00000516080 ZNF804BA4D1E1 1349 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 TNKSO95271 1327 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 LRRC14BA6NHZ5 514 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 VPS4BO75351 444 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 JTBO76095 146 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 KIF20AO95235 890 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 ITGB6P18564 788 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 GCLCP48506 637 aaPredicted RBP3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 ALDH9A1P49189 494 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 CDKN1CP49918 316 aaPredicted RBP3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 HK3P52790 923 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 TFF2Q03403 129 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 NOGQ13253 232 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 SFRP4Q6FHJ7 346 aaPredicted RBP3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 ZNF425Q6IV72 752 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 ANKRD16Q6P6B7 361 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 HEATR3Q7Z4Q2 680 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 ZNF804AQ7Z570 1209 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 PPP1R32Q7Z5V6 425 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 USP37Q86T82 979 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 FAM109AQ8N4B1 249 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 PRPF38AQ8NAV1 312 aaKnown RBP3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 TBC1D5Q92609 795 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 FAM167AQ96KS9 214 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 C1orf43Q9BWL3 253 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 DKK3Q9UBP4 350 aa3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 FEZ2Q9UHY8 353 aaPredicted RBP3.82□□□□□ -1.8
RNU4-49P-201ENST00000516080 TLR5O60602 858 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 CHRM3P20309 590 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 PDCP20941 246 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 CERS1P27544 350 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 PHKA1P46020 1223 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 RECQLP46063 649 aaPredicted RBP3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 EIF2B5Q13144 721 aaKnown RBP3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 FAM50AQ14320 339 aaKnown RBP3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 ODF1Q14990 250 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 SLC44A4Q53GD3 710 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 MTX3Q5HYI7 312 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 AARS2Q5JTZ9 985 aaKnown RBP3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 FAM160B1Q5W0V3 765 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 SLC29A4Q7RTT9 530 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 DTX2Q86UW9 622 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 CPA6Q8N4T0 437 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 VGLL2Q8N8G2 317 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 KLHDC4Q8TBB5 520 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 TNPO1Q92973 898 aaKnown RBP3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 RGMAQ96B86 450 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 MRPL46Q9H2W6 279 aaKnown RBP3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 ABCF2Q9UG63 623 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 AGAP1Q9UPQ3 857 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 SH2B3Q9UQQ2 575 aa3.81□□□□□ -1.8
RNU4-49P-201ENST00000516080 SBNO2Q9Y2G9 1366 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 PROB1E7EW31 1015 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 SLC16A3O15427 465 aaKnown RBP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 SNUPNO95149 360 aaKnown RBP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 ZRANB2O95218 330 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 ONECUT2O95948 504 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 FTLP02792 175 aaPredicted RBP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 PRR35P0CG20 571 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 KELP23276 732 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 PCSK6P29122 969 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 TOB1P50616 345 aaPredicted RBP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 SSBP2P81877 361 aaPredicted RBP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 AMPD3Q01432 767 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 TMEM119Q4V9L6 283 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 VPS53Q5VIR6 699 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 ICE2Q659A1 982 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 ZNF782Q6ZMW2 699 aaPredicted RBP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 USP45Q70EL2 814 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 WDR53Q7Z5U6 358 aaPredicted RBP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 PRR18Q8N4B5 295 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 FANCBQ8NB91 859 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 NRIP3Q9NQ35 241 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 LMBRD1Q9NUN5 540 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 MRPS18AQ9NVS2 196 aaKnown RBP3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 SERGEFQ9UGK8 458 aa3.8□□□□□ -1.8
RNU4-49P-201ENST00000516080 WASHC2CQ9Y4E1 1318 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms