RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 KRT20P35900 424 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 EMBQ6PCB8 327 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 ACSF2Q96CM8 615 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 MXRA8Q9BRK3 442 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 ADARB2Q9NS39 739 aaKnown RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 DDIT4Q9NX09 232 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 WDR35Q9P2L0 1181 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 APEX2Q9UBZ4 518 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 CASTOR2A6NHX0 329 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF189O75820 626 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 RPS12P25398 132 aaKnown RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 SLC1A1P43005 524 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 PDK1Q15118 436 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 CYTH1Q15438 398 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 MB21D2Q8IYB1 491 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 EFEMP1Q12805 493 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 PIGHQ14442 188 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 TRIM65Q6PJ69 517 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 PCSK9Q8NBP7 692 aaKnown RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 CYGBQ8WWM9 190 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 TRMT6Q9UJA5 497 aaKnown RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 C2orf81A6NN90 581 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 SKAP2O75563 359 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 FAM107AO95990 144 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 FOXO4P98177 505 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF284Q2VY69 593 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 EPC2Q52LR7 807 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 BTNL9Q6UXG8 535 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 MIER2Q8N344 545 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 SLC35G2Q8TBE7 412 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 NDE1Q9NXR1 346 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 SP100P23497 879 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 PLA2G4AP47712 749 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 AMPD2Q01433 879 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 STARD3Q14849 445 aa11.49□□□□□ -0.57
TRIM41-209ENST00000515834 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 ZMAT2Q96NC0 199 aaKnown RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 THG1LQ9NWX6 298 aaKnown RBP11.49□□□□□ -0.57
TRIM41-209ENST00000515834 CYB561D2O14569 222 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 HOXA2O43364 376 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 DGKIO75912 1065 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 PDIA6Q15084 440 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 MAPRE1Q15691 268 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 ISCA1Q9BUE6 129 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 TARS2Q9BW92 718 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 PPIEQ9UNP9 301 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 PITPNM2Q9BZ72 1349 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 CHUKO15111 745 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 SRP72O76094 671 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF286BP0CG31 522 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 CNTN1Q12860 1018 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 UGP2Q16851 508 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 RABGAP1LQ5R372 815 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 CALML6Q8TD86 181 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 RNPC3Q96LT9 517 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 TRPM5Q9NZQ8 1165 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 CHMP2BQ9UQN3 213 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 PSMD12O00232 456 aaPredicted RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 PRIM2P49643 509 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 TCEA2Q15560 299 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 CLEC16AQ2KHT3 1053 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 FBXW10Q5XX13 1052 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 LAYNQ6UX15 382 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 ANO5Q75V66 913 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 TRIM69Q86WT6 500 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 GUF1Q8N442 669 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 SPATA18Q8TC71 538 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 AMACRQ9UHK6 382 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 TUBE1Q9UJT0 475 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 VWA5AO00534 786 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 PDXKO00764 312 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 GRK3P35626 688 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 GGCXP38435 758 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 RPS7P62081 194 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 SGCGQ13326 291 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 SLC15A2Q16348 729 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 IYDQ6PHW0 289 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 ATL2Q8NHH9 583 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 PRPF18Q99633 342 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 FOXN1O15353 648 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 EXTL3O43909 919 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 TBC1D4O60343 1298 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 CCDC22O60826 627 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 FOXR1Q6PIV2 292 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 TADA1Q96BN2 335 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
TRIM41-209ENST00000515834 CDYLQ9Y232 598 aa11.48□□□□□ -0.57
TRIM41-209ENST00000515834 PNPLA4P41247 253 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 MAP3K7CLP57077 242 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 UGT3A1Q6NUS8 523 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 RINLQ6ZS11 566 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 BBS7Q8IWZ6 715 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 VPS37AQ8NEZ2 397 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 RAB23Q9ULC3 237 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms