RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GDAP1L1Q96MZ0 367 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 CYTH4Q9UIA0 394 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 KIAA1257Q9ULG3 409 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 NFU1Q9UMS0 254 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 O00370 1275 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 FSCN2O14926 492 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 GJB6O95452 261 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 AKAP5P24588 427 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 CHRNA3P32297 505 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 AARSP49588 968 aaKnown RBP eCLIP15.83■□□□□ 0.12
VCAN-211ENST00000513984 CAP1Q01518 475 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 GDF6Q6KF10 455 aaPredicted RBP15.83■□□□□ 0.12
VCAN-211ENST00000513984 RHOT1Q8IXI2 618 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 IFT81Q8WYA0 676 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 C18orf25Q96B23 403 aaPredicted RBP15.83■□□□□ 0.12
VCAN-211ENST00000513984 PCYOX1Q9UHG3 505 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 MTUS1Q9ULD2 1270 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 TRPV2Q9Y5S1 764 aa15.83■□□□□ 0.12
VCAN-211ENST00000513984 FAM187AA6NFU0 413 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 M0QZ92 97 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 PPEF2O14830 753 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 XPOTO43592 962 aaKnown RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 MICAL2O94851 1124 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 OAS2P29728 719 aaKnown RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 ECHS1P30084 290 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 DR1Q01658 176 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 ZNF252P-AS1Q0IIN9 211 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 TRADDQ15628 312 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 SGO2Q562F6 1265 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 GLRA4Q5JXX5 417 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 C9orf57Q5W0N0 161 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 RSPH3Q86UC2 560 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 SESTD1Q86VW0 696 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 KATNAL2Q8IYT4 538 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 NIPA2Q8N8Q9 360 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 C12orf50Q8NA57 414 aaPredicted RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 SMG8Q8ND04 991 aaKnown RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 MCEEQ96PE7 176 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 APOL6Q9BWW8 343 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 NT5C1AQ9BXI3 368 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 ST7Q9NRC1 585 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 WDR35Q9P2L0 1181 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 IPPQ9Y573 584 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 CDY2AQ9Y6F7 541 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 SMIM28A0A1B0GU29 152 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 TCRBV7S2A1N4TA0A589 114 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 H3BQF6 201 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 PIRO00625 290 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 AOC2O75106 756 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 CD4P01730 458 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 RPLP2P05387 115 aaKnown RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 ATF7P17544 494 aaPredicted RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 CST5P28325 142 aaPredicted RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 GABRB2P47870 512 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 TAS2R40P59535 323 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 STILQ15468 1287 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 CYP4A22Q5TCH4 519 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 RPAINQ86UA6 219 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 SERINC5Q86VE9 423 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 MREGQ8N565 214 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 KLHDC9Q8NEP7 349 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 HEXIM2Q96MH2 286 aaKnown RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 RUNDC3BQ96NL0 473 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 CPXM1Q96SM3 734 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 RAB17Q9H0T7 212 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 XPNPEP3Q9NQH7 507 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 UTP11Q9Y3A2 253 aaKnown RBP15.82■□□□□ 0.12
VCAN-211ENST00000513984 SNX9Q9Y5X1 595 aa15.82■□□□□ 0.12
VCAN-211ENST00000513984 SIGLEC16A6NMB1 481 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 M0QYV0 167 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 RARAP10276 462 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 CYP3A5P20815 502 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 GPD2P43304 727 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 SP3Q02447 781 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 PIGHQ14442 188 aaPredicted RBP15.81■□□□□ 0.12
VCAN-211ENST00000513984 DAB2IPQ5VWQ8 1189 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 DCUN1D2Q6PH85 259 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 LCLAT1Q6UWP7 414 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 MAIP1Q8WWC4 291 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 MAGOHBQ96A72 148 aaKnown RBP15.81■□□□□ 0.12
VCAN-211ENST00000513984 C18orf8Q96DM3 657 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 ZNF560Q96MR9 790 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 FAM114A2Q9NRY5 505 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 PARP2Q9UGN5 583 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 FRMPD3Q5JV73 1810 aa15.81■□□□□ 0.12
VCAN-211ENST00000513984 FAM153BP0C7A2 387 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
VCAN-211ENST00000513984 CCND3P30281 292 aaPredicted RBP15.8■□□□□ 0.12
VCAN-211ENST00000513984 PTGIRP43119 386 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 FNTAP49354 379 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 OGDHQ02218 1023 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 PDCLQ13371 301 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 ZNF268Q14587 947 aaPredicted RBP15.8■□□□□ 0.12
VCAN-211ENST00000513984 FAM153CQ494X1 144 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 LRRC38Q5VT99 294 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 TWF2Q6IBS0 349 aaKnown RBP15.8■□□□□ 0.12
VCAN-211ENST00000513984 CCSAPQ6IQ19 270 aaPredicted RBP15.8■□□□□ 0.12
VCAN-211ENST00000513984 XYLT1Q86Y38 959 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms