RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 TTPALQ9BTX7 342 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 HERC2P3Q9BVR0 1158 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 NT5C1AQ9BXI3 368 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 ELOVL4Q9GZR5 314 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 CHST7Q9NS84 486 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 DDX43Q9NXZ2 648 aaKnown RBP13.37□□□□□ -0.27
PDPN-210ENST00000513143 HMGXB4Q9UGU5 601 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 RB1P06400 928 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 PAEPP09466 180 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 FECHP22830 423 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 PRKCIP41743 596 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 BPIFB4P59827 614 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 SMAD3P84022 425 aaKnown RBP13.36□□□□□ -0.27
PDPN-210ENST00000513143 PTK2Q05397 1052 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 ASIC2Q16515 512 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 MEA1Q16626 185 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 ZNF394Q53GI3 561 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 RTP2Q5QGT7 225 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
PDPN-210ENST00000513143 WDR59Q6PJI9 974 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 CRYBG2Q8N1P7 616 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 THEM5Q8N1Q8 247 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 SLC4A11Q8NBS3 891 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 TMEM176AQ96HP8 235 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 ACBD6Q9BR61 282 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 NKX2-4Q9H2Z4 354 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 LZTS1Q9Y250 596 aa13.36□□□□□ -0.27
PDPN-210ENST00000513143 A0A1W2PPC1 479 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 HCRTO43612 131 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 TBC1D4O60343 1298 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 SERPING1P05155 500 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 PDGFRBP09619 1106 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 PCSK1P29120 753 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 CDK17Q00537 523 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 DSG1Q02413 1049 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 ARID5AQ03989 594 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 ORC1Q13415 861 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 KIAA0319Q5VV43 1072 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 HGSNATQ68CP4 663 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 SPRED2Q7Z698 418 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 ACOT1Q86TX2 421 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 SLC47A2Q86VL8 602 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 GPR65Q8IYL9 337 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 VPS52Q8N1B4 723 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 PIK3R5Q8WYR1 880 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 TNIP3Q96KP6 325 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 B3GALT6Q96L58 329 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 OXCT2Q9BYC2 517 aaPredicted RBP13.35□□□□□ -0.27
PDPN-210ENST00000513143 DNAI2Q9GZS0 605 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 ZNHIT6Q9NWK9 470 aaKnown RBP13.35□□□□□ -0.27
PDPN-210ENST00000513143 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
PDPN-210ENST00000513143 CDH9Q9ULB4 789 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 KIAA1257Q9ULG3 409 aa13.35□□□□□ -0.27
PDPN-210ENST00000513143 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
PDPN-210ENST00000513143 H7C4K7 107 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 VDRP11473 427 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 SKILP12757 684 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 CYP11B1P15538 503 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 ACAT1P24752 427 aaKnown RBP13.34□□□□□ -0.27
PDPN-210ENST00000513143 DNAJB2P25686 324 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 GNA15P30679 374 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 GLUD2P49448 558 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 UBE3AQ05086 875 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 KLHL30Q0D2K2 578 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 ZNF280DQ6N043 979 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 LRRC8AQ8IWT6 810 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 B3GALNT2Q8NCR0 500 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 LNX1Q8TBB1 728 aaPredicted RBP13.34□□□□□ -0.27
PDPN-210ENST00000513143 SPPL3Q8TCT6 385 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 ZNF606Q8WXB4 792 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 RIN2Q8WYP3 895 aaPredicted RBP13.34□□□□□ -0.27
PDPN-210ENST00000513143 HEXIM2Q96MH2 286 aaKnown RBP13.34□□□□□ -0.27
PDPN-210ENST00000513143 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 C11orf84Q9BUA3 381 aaPredicted RBP13.34□□□□□ -0.27
PDPN-210ENST00000513143 ZBP1Q9H171 429 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 SLC28A3Q9HAS3 691 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 ACP6Q9NPH0 428 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 ARHGAP20Q9P2F6 1191 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 MTRRQ9UBK8 725 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 NOCTQ9UK39 431 aaKnown RBP13.34□□□□□ -0.27
PDPN-210ENST00000513143 BACE2Q9Y5Z0 518 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
PDPN-210ENST00000513143 MYH10P35580 1976 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 CHD7Q9P2D1 2997 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 OR6C75A6NL08 312 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 LILRB3O75022 631 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 ATP2C2O75185 946 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 CALCAP01258 141 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 PTMAP06454 111 aaKnown RBP13.33□□□□□ -0.28
PDPN-210ENST00000513143 CTSAP10619 480 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 PTPN1P18031 435 aaKnown RBP13.33□□□□□ -0.28
PDPN-210ENST00000513143 PDE6CP51160 858 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms