RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ZNF425Q6IV72 752 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 USP45Q70EL2 814 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 PPP1R32Q7Z5V6 425 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 MIER2Q8N344 545 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 FAM109AQ8N4B1 249 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 AOPEPQ8N6M6 819 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 HASPINQ8TF76 798 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 SCARB1Q8WTV0 552 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 FKBP10Q96AY3 582 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 OSBPL9Q96SU4 736 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 TINAGL1Q9GZM7 467 aaPredicted RBP3.01□□□□□ -1.93
PDGFC-208ENST00000512711 TMX1Q9H3N1 280 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 MAN1C1Q9NR34 630 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 RAD54BQ9Y620 910 aa3.01□□□□□ -1.93
PDGFC-208ENST00000512711 TARM1B6A8C7 271 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 ZNF213O14771 459 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 DNAJB5O75953 348 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 TTLL1O95922 423 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 PRKCGP05129 697 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 RPLP2P05387 115 aaKnown RBP3□□□□□ -1.93
PDGFC-208ENST00000512711 FAM163BP0C2L3 166 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 EBLN1P0CF75 366 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 DRD4P21917 467 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 LIPAP38571 399 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 GCLCP48506 637 aaPredicted RBP3□□□□□ -1.93
PDGFC-208ENST00000512711 ZNF81P51508 661 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 EXOSC9Q06265 439 aaKnown RBP3□□□□□ -1.93
PDGFC-208ENST00000512711 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 TMEM108Q6UXF1 575 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 MAVSQ7Z434 540 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 C1QL2Q7Z5L3 287 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 PCSK9Q8NBP7 692 aaKnown RBP3□□□□□ -1.93
PDGFC-208ENST00000512711 FAM46DQ8NEK8 389 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 SEMA6DQ8NFY4 1073 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 FAM136AQ96C01 138 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 REPS1Q96D71 796 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 PBKQ96KB5 322 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 SH2D3AQ9BRG2 576 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 GTPBP4Q9BZE4 634 aaKnown RBP3□□□□□ -1.93
PDGFC-208ENST00000512711 EHD3Q9NZN3 535 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 CFAP97Q9P2B7 532 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 PADI4Q9UM07 663 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 PCDHA6Q9UN73 950 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 POLHQ9Y253 713 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 SSX2IPQ9Y2D8 614 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 WNT6Q9Y6F9 365 aa3□□□□□ -1.93
PDGFC-208ENST00000512711 ALG1L2C9J202 215 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 M0QYG6 137 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 ORC4O43929 436 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 URI1O94763 535 aaPredicted RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 FTLP02792 175 aaPredicted RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 ALDH2P05091 517 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 GNAI3P08754 354 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 TYRP14679 529 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 ITGALP20701 1170 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 MPGP29372 298 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 CD6P30203 668 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 RECQLP46063 649 aaPredicted RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 SOX10P56693 466 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 GNAI1P63096 354 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 NKX6-1P78426 367 aaPredicted RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 SSBP2P81877 361 aaPredicted RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 BMPR2Q13873 1038 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 PLS1Q14651 629 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 FAM153CQ494X1 144 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 BRDTQ58F21 947 aaPredicted RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 ZNF66Q6ZN08 573 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 CPA6Q8N4T0 437 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 PLBD2Q8NHP8 589 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 KLHDC4Q8TBB5 520 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 SLC46A1Q96NT5 459 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 MACROD1Q9BQ69 325 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 CNPPD1Q9BV87 410 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 QTRT1Q9BXR0 403 aaKnown RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 TTYH3Q9C0H2 523 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 PCDH12Q9NPG4 1184 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 KMT5AQ9NQR1 393 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 ARHGEF3Q9NR81 526 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 LMBRD1Q9NUN5 540 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 GNL3LQ9NVN8 582 aaKnown RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 RLIMQ9NVW2 624 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 DLL3Q9NYJ7 618 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 SERTAD3Q9UJW9 196 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 LUC7L2Q9Y383 392 aaKnown RBP2.99□□□□□ -1.93
PDGFC-208ENST00000512711 CACNA1IQ9P0X4 2223 aa2.99□□□□□ -1.93
PDGFC-208ENST00000512711 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 TISP43B9A030 160 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 H3BUI4 141 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 hCG_1984214I3L0E3 225 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 TP73O15350 636 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 SNUPNO95149 360 aaKnown RBP2.98□□□□□ -1.93
PDGFC-208ENST00000512711 LATS1O95835 1130 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 CHEK2O96017 543 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 IL6RP08887 468 aaPredicted RBP2.98□□□□□ -1.93
PDGFC-208ENST00000512711 FTH1P19P0C7X4 201 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 PRR35P0CG20 571 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 CYP2C18P33260 490 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 GRM1Q13255 1194 aa2.98□□□□□ -1.93
PDGFC-208ENST00000512711 SRSF7Q16629 238 aaKnown RBP eCLIP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms