RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 FECHP22830 423 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 TSPY1Q01534 308 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 SHHQ15465 462 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 SPA17Q15506 151 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 MAPRE1Q15691 268 aaKnown RBP11.56□□□□□ -0.56
PFDN1-204ENST00000512707 USP41Q3LFD5 358 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 ZNF394Q53GI3 561 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 SGO2Q562F6 1265 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 C9orf50Q5SZB4 431 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 FAM171A1Q5VUB5 890 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 ZNF280DQ6N043 979 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 PPP1R2P3Q6NXS1 205 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 ANKS3Q6ZW76 656 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 Q7L0L9 218 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 LIMS2Q7Z4I7 341 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 IRF2BP2Q7Z5L9 587 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 CEP57Q86XR8 500 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-204ENST00000512707 EPS8L1Q8TE68 723 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 HEXIM2Q96MH2 286 aaKnown RBP11.56□□□□□ -0.56
PFDN1-204ENST00000512707 SAMD11Q96NU1 681 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 MRPL45Q9BRJ2 306 aaKnown RBP11.56□□□□□ -0.56
PFDN1-204ENST00000512707 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.56□□□□□ -0.56
PFDN1-204ENST00000512707 SDCBP2Q9H190 292 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 HAUS4Q9H6D7 363 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 NHEJ1Q9H9Q4 299 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-204ENST00000512707 MTMR10Q9NXD2 777 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 DDX43Q9NXZ2 648 aaKnown RBP11.56□□□□□ -0.56
PFDN1-204ENST00000512707 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 CDH9Q9ULB4 789 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 PCDHA11Q9Y5I1 949 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 ATP8B3O60423 1300 aa11.56□□□□□ -0.56
PFDN1-204ENST00000512707 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.55□□□□□ -0.56
PFDN1-204ENST00000512707 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.55□□□□□ -0.56
PFDN1-204ENST00000512707 NT5C1B-RDH14C9J2C7 533 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 I3L4J1 428 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 GABRDO14764 452 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 ITGB1P05556 798 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 PDGFRBP09619 1106 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 CTNNB1P35222 781 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 CLCN1P35523 988 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 EIF4A3P38919 411 aaKnown RBP11.55□□□□□ -0.56
PFDN1-204ENST00000512707 PBX3P40426 434 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 ZNF132P52740 706 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 RAD23BP54727 409 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 SLC8A3P57103 927 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 CDR2Q01850 454 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 CREMQ03060 361 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 RAB30Q15771 203 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 WDR59Q6PJI9 974 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 TRIM72Q6ZMU5 477 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 SLC47A2Q86VL8 602 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 DCP1BQ8IZD4 617 aaKnown RBP11.55□□□□□ -0.56
PFDN1-204ENST00000512707 SLC39A11Q8N1S5 342 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 KBTBD7Q8WVZ9 684 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 CLP1Q92989 425 aaKnown RBP11.55□□□□□ -0.56
PFDN1-204ENST00000512707 AGPAT1Q99943 283 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 SYT15Q9BQS2 421 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 ACBD6Q9BR61 282 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 TTPALQ9BTX7 342 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 PLVAPQ9BX97 442 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 MARCH5Q9NX47 278 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 HCSTQ9UBK5 93 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 HESX1Q9UBX0 185 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
PFDN1-204ENST00000512707 TIMM13Q9Y5L4 95 aaPredicted RBP11.55□□□□□ -0.56
PFDN1-204ENST00000512707 OR6C75A6NL08 312 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 F8W810 466 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 OAZ2O95190 189 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 LSM8O95777 96 aaKnown RBP11.54□□□□□ -0.56
PFDN1-204ENST00000512707 SOD2P04179 222 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 URODP06132 367 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 FGFR3P22607 806 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 TKTP29401 623 aaKnown RBP11.54□□□□□ -0.56
PFDN1-204ENST00000512707 GLUD2P49448 558 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 KIF11P52732 1056 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 KRT83P78385 493 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 CTXN3Q4LDR2 81 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 TAF3Q5VWG9 929 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 E4F1Q66K89 784 aaPredicted RBP11.54□□□□□ -0.56
PFDN1-204ENST00000512707 HGSNATQ68CP4 663 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 CD300LGQ6UXG3 332 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 DDX53Q86TM3 631 aaKnown RBP11.54□□□□□ -0.56
PFDN1-204ENST00000512707 ACOT1Q86TX2 421 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 NOP9Q86U38 636 aaKnown RBP11.54□□□□□ -0.56
PFDN1-204ENST00000512707 GPIHBP1Q8IV16 184 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 CRYBG2Q8N1P7 616 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 SLC4A11Q8NBS3 891 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 B3GALNT2Q8NCR0 500 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 MSANTD4Q8NCY6 345 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 NOX5Q96PH1 765 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 C11orf84Q9BUA3 381 aaPredicted RBP11.54□□□□□ -0.56
PFDN1-204ENST00000512707 GPR62Q9BZJ7 368 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 ELOVL4Q9GZR5 314 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 ARHGAP20Q9P2F6 1191 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 HMGXB4Q9UGU5 601 aa11.54□□□□□ -0.56
PFDN1-204ENST00000512707 NOCTQ9UK39 431 aaKnown RBP11.54□□□□□ -0.56
PFDN1-204ENST00000512707 SCN1AP35498 2009 aa11.53□□□□□ -0.56
PFDN1-204ENST00000512707 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
PFDN1-204ENST00000512707 LINC01553A4QN01 128 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms