RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
VEGFA-216ENST00000512683 RSPRY1Q96DX4 576 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
VEGFA-216ENST00000512683 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 CCDC39Q9UFE4 941 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 ANKRD63C9JTQ0 380 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 PPEF2O14830 753 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 SLC30A4O14863 429 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 CSH1P0DML2 217 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 CSH2P0DML3 217 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 GAP43P17677 238 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 ACOT2P49753 483 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 TSPY1Q01534 308 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 GRSF1Q12849 480 aaKnown RBP eCLIP13.56□□□□□ -0.24
VEGFA-216ENST00000512683 ZNF268Q14587 947 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-216ENST00000512683 SLC39A12Q504Y0 691 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 FAM173BQ6P4H8 233 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 SLC39A4Q6P5W5 647 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 CMTM8Q8IZV2 173 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 TMEM86AQ8N2M4 240 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 CAMKK1Q8N5S9 505 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 CCDC26Q8TAB7 109 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 LEO1Q8WVC0 666 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-216ENST00000512683 EPSTI1Q96J88 318 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 ZNF560Q96MR9 790 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 LRRC3BQ96PB8 259 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 SEPT5Q99719 369 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-216ENST00000512683 FAM83CQ9BQN1 747 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 ACBD6Q9BR61 282 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 SLC46A2Q9BY10 475 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 ZHX3Q9H4I2 956 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 ABCB6Q9NP58 842 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 PARD6AQ9NPB6 346 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 UXTQ9UBK9 157 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-216ENST00000512683 STK17AQ9UEE5 414 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 PCDHB5Q9Y5E4 795 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 PCDHB13Q9Y5F0 798 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 DNAH14Q0VDD8 3507 aa13.56□□□□□ -0.24
VEGFA-216ENST00000512683 SLC38A8A6NNN8 435 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 TRDMT1O14717 391 aaKnown RBP13.55□□□□□ -0.24
VEGFA-216ENST00000512683 AKAP3O75969 853 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 F11P03951 625 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 NFICP08651 508 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 NMT1P30419 496 aaKnown RBP13.55□□□□□ -0.24
VEGFA-216ENST00000512683 AVPR1AP37288 418 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
VEGFA-216ENST00000512683 SPEM2Q0P670 501 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 ALCAMQ13740 583 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
VEGFA-216ENST00000512683 PDGFRLQ15198 375 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 FBXO43Q4G163 708 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 PRR23BQ6ZRT6 265 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 DPH6Q7L8W6 267 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 MON1AQ86VX9 555 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 POMGNT1Q8WZA1 660 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 CEP295NLQ96MC4 621 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
VEGFA-216ENST00000512683 STRA6Q9BX79 667 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 GKN1Q9NS71 199 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 SEMA4GQ9NTN9 838 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 TDP1Q9NUW8 608 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 FBXO2Q9UK22 296 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-216ENST00000512683 MTMR6Q9Y217 621 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 MORC2Q9Y6X9 1032 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-216ENST00000512683 NCANO14594 1321 aa13.55□□□□□ -0.24
VEGFA-216ENST00000512683 CHURC1-FNTBB4DL54 471 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 KIAA0391O15091 583 aaKnown RBP13.54□□□□□ -0.24
VEGFA-216ENST00000512683 HMGA1P17096 107 aaKnown RBP13.54□□□□□ -0.24
VEGFA-216ENST00000512683 ATF6P18850 670 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 GARTP22102 1010 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 FNTBP49356 437 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 LIMK1P53667 647 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 RUNX3Q13761 415 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 TMEM196Q5HYL7 178 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 STXBP5Q5T5C0 1151 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 WSCD1Q658N2 575 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 CC2D1AQ6P1N0 951 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-216ENST00000512683 TXNDC11Q6PKC3 985 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 CRELD2Q6UXH1 353 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-216ENST00000512683 SV2BQ7L1I2 683 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 CACNA2D4Q7Z3S7 1137 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 LRRTM3Q86VH5 581 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 KIAA1958Q8N8K9 716 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 MRPS31Q92665 395 aaKnown RBP13.54□□□□□ -0.24
VEGFA-216ENST00000512683 MYRFLQ96LU7 910 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 ACCSQ96QU6 501 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
VEGFA-216ENST00000512683 TPRP12270 2363 aaKnown RBP13.54□□□□□ -0.24
VEGFA-216ENST00000512683 FANCMQ8IYD8 2048 aa13.54□□□□□ -0.24
VEGFA-216ENST00000512683 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-216ENST00000512683 HUS1O60921 280 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 PPP1R37O75864 691 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 PFKLP17858 780 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 DRD1P21728 446 aa13.53□□□□□ -0.24
VEGFA-216ENST00000512683 ADSSP30520 456 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms