RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 PLGP00747 810 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 LYNP07948 512 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 NCAM1P13591 858 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 C4BPBP20851 252 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 MDM2Q00987 491 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 KLC1Q07866 573 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 MTX1Q13505 466 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 PI16Q6UXB8 463 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 OR8K1Q8NGG5 319 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 FBXO41Q8TF61 875 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 SETD7Q8WTS6 366 aaKnown RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 FRMD8Q9BZ67 464 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 MRPL17Q9NRX2 175 aaKnown RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 INTS13Q9NVM9 706 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 RBAKQ9NYW8 714 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 KANSL3Q9P2N6 904 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 ANGPTL2Q9UKU9 493 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 DMTF1Q9Y222 760 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 PRXQ9BXM0 1461 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 KITP10721 976 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 CYP2A6P11509 494 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 POU1F1P28069 291 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 GNA15P30679 374 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 IGFALSP35858 605 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 DHPSP49366 369 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 CCT8P50990 548 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 COPZ1P61923 177 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 SEPT2Q15019 361 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 XKR4Q5GH76 650 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 CYP20A1Q6UW02 462 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 TDRPQ86YL5 185 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 NUP93Q8N1F7 819 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 ABTB1Q969K4 478 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 SERAC1Q96JX3 654 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 CDK5RAP1Q96SZ6 601 aaKnown RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 NT5C1AQ9BXI3 368 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 RNF121Q9H920 327 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 EXOSC4Q9NPD3 245 aaKnown RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 EMILIN3Q9NT22 766 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 CARMIL3Q8ND23 1372 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 CHUKO15111 745 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 KRT16P08779 473 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 GUCY2CP25092 1073 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 SOX6P35712 828 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 EIF4A3P38919 411 aaKnown RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 CTCFP49711 727 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 DYNC1I2Q13409 638 aaKnown RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 DUS1LQ6P1R4 473 aaKnown RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 FBXL19Q6PCT2 694 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 APOA5Q6Q788 366 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 RASGRP4Q8TDF6 673 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 C19orf60Q96EN9 201 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 GINS4Q9BRT9 223 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 A0A087WZ62 844 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 CLEC3AO75596 197 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 IL10P22301 178 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 ATP2C1P98194 919 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 WLSQ5T9L3 541 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 FAM20CQ8IXL6 584 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 TEX13BQ9BXU2 312 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 UBXN6Q9BZV1 441 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 SEC31BQ9NQW1 1179 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 AHSPQ9NZD4 102 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 CTNNAL1Q9UBT7 734 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 VPS9D1Q9Y2B5 631 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 ADCY3O60266 1144 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 TRIM16O95361 564 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 ECDO95905 644 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 NTSP30990 170 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 LPIN1Q14693 890 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 ZKSCAN8Q15776 578 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 E2F4Q16254 413 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 C16orf87Q6PH81 154 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 GSPT2Q8IYD1 628 aaKnown RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 PTPRN2Q92932 1015 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 RERGQ96A58 199 aaPredicted RBP9.3□□□□□ -0.92
VCAN-208ENST00000512590 CCDC51Q96ER9 411 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 KLHL31Q9H511 634 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 ZMYM6O95789 1325 aa9.3□□□□□ -0.92
VCAN-208ENST00000512590 RHOBTB3O94955 611 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 ESRRAP11474 423 aaPredicted RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 QARSP47897 775 aaKnown RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 VAMP7P51809 220 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 STILQ15468 1287 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 ZNF697Q5TEC3 545 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 FBXO42Q6P3S6 717 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 ADCK1Q86TW2 530 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 TRMT6Q9UJA5 497 aaKnown RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 SBNO1A3KN83 1393 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 KPNA3O00505 521 aaPredicted RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 PFDN1O60925 122 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 CSNK2BP67870 215 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 POU4F1Q01851 419 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 ZC2HC1CQ53FD0 456 aaPredicted RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 KLHL35Q6PF15 583 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 TESK2Q96S53 571 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 TLE6Q9H808 572 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 MIEF1Q9NQG6 463 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 INTS9Q9NV88 658 aaKnown RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 INTUQ9ULD6 942 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms