RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PLA2G2FQ9BZM2 168 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 AVENQ9NQS1 362 aaPredicted RBP14.28□□□□□ -0.12
RNF4-215ENST00000511843 ASAH2Q9NR71 780 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 GDAP2Q9NXN4 497 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 DDX43Q9NXZ2 648 aaKnown RBP14.28□□□□□ -0.12
RNF4-215ENST00000511843 MAFFQ9ULX9 164 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 ZFP37Q9Y6Q3 630 aaPredicted RBP14.28□□□□□ -0.12
RNF4-215ENST00000511843 MYH10P35580 1976 aa14.27□□□□□ -0.12
RNF4-215ENST00000511843 ANAPC1Q9H1A4 1944 aa14.27□□□□□ -0.12
RNF4-215ENST00000511843 COL4A2P08572 1712 aa14.27□□□□□ -0.12
RNF4-215ENST00000511843 NCANO14594 1321 aa14.27□□□□□ -0.12
RNF4-215ENST00000511843 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 LRRIQ3A6PVS8 624 aaPredicted RBP14.27□□□□□ -0.13
RNF4-215ENST00000511843 ATP2C2O75185 946 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 RHOBTB3O94955 611 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 NR3C1P04150 777 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 MYL1P05976 194 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 NPR3P17342 541 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 GPC5P78333 572 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 FAM78AQ5JUQ0 283 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 STXBP5Q5T5C0 1151 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 SDHAF4Q5VUM1 108 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 CWF19L1Q69YN2 538 aaKnown RBP14.27□□□□□ -0.13
RNF4-215ENST00000511843 TANGO2Q6ICL3 276 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 MTSS1LQ765P7 747 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 TMEM105Q8N8V8 129 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 FAM200AQ8TCP9 573 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 KBTBD7Q8WVZ9 684 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 NXPE3Q969Y0 559 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 PI4K2AQ9BTU6 479 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 DMAC2Q9NW81 257 aa14.27□□□□□ -0.13
RNF4-215ENST00000511843 CGNQ9P2M7 1197 aaKnown RBP14.27□□□□□ -0.13
RNF4-215ENST00000511843 R3HCC1Q9Y3T6 440 aaKnown RBP14.27□□□□□ -0.13
RNF4-215ENST00000511843 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 GOLGA6L4A6NEF3 574 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 PDXKO00764 312 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 ZNF197O14709 1029 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 PI15O43692 258 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 HAPLN1P10915 354 aaPredicted RBP14.26□□□□□ -0.13
RNF4-215ENST00000511843 FCARP24071 287 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 LMO2P25791 158 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 EPHA5P54756 1037 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 MYL6P60660 151 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 PSMC1P62191 440 aaKnown RBP14.26□□□□□ -0.13
RNF4-215ENST00000511843 DLG4P78352 724 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 TSPY1Q01534 308 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 MYO1EQ12965 1108 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 PLD1Q13393 1074 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 GRM2Q14416 872 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 INTS6LQ5JSJ4 861 aaKnown RBP14.26□□□□□ -0.13
RNF4-215ENST00000511843 CEP135Q66GS9 1140 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 GAREM2Q75VX8 874 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 DNAJB7Q7Z6W7 309 aaPredicted RBP14.26□□□□□ -0.13
RNF4-215ENST00000511843 DCP1BQ8IZD4 617 aaKnown RBP14.26□□□□□ -0.13
RNF4-215ENST00000511843 TOP6BLQ8N6T0 577 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 GOLGA5Q8TBA6 731 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 MMS19Q96T76 1030 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 PKMYT1Q99640 499 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 SLITRK6Q9H5Y7 841 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 GDE1Q9NZC3 331 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 GTF3C4Q9UKN8 822 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 NME7Q9Y5B8 376 aa14.26□□□□□ -0.13
RNF4-215ENST00000511843 MYBPHLA2RUH7 354 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 STK25O00506 426 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 PDGFRBP09619 1106 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 CYP2F1P24903 491 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 PLA2G5P39877 138 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 VIPR2P41587 438 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 CYP4F8P98187 520 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 MYL7Q01449 175 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 SNW1Q13573 536 aaKnown RBP14.25□□□□□ -0.13
RNF4-215ENST00000511843 TDRD10Q5VZ19 366 aaKnown RBP14.25□□□□□ -0.13
RNF4-215ENST00000511843 ASTLQ6HA08 431 aaPredicted RBP14.25□□□□□ -0.13
RNF4-215ENST00000511843 TMEM86AQ8N2M4 240 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 ENGASEQ8NFI3 743 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 ZSCAN18Q8TBC5 510 aaPredicted RBP14.25□□□□□ -0.13
RNF4-215ENST00000511843 SPPL2BQ8TCT7 592 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 PSMG2Q969U7 264 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 CCDC47Q96A33 483 aaKnown RBP14.25□□□□□ -0.13
RNF4-215ENST00000511843 FAM122AQ96E09 287 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 ASB16Q96NS5 453 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 ACBD6Q9BR61 282 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 MRPL45Q9BRJ2 306 aaKnown RBP14.25□□□□□ -0.13
RNF4-215ENST00000511843 WNT16Q9UBV4 365 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 PCDHB5Q9Y5E4 795 aa14.25□□□□□ -0.13
RNF4-215ENST00000511843 GABRDO14764 452 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 CALUO43852 315 aaPredicted RBP14.24□□□□□ -0.13
RNF4-215ENST00000511843 PHACTR2O75167 634 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 PRPF40AO75400 957 aaKnown RBP14.24□□□□□ -0.13
RNF4-215ENST00000511843 CLSTN1O94985 981 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 GABRR2P28476 465 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 TUFMP49411 452 aaKnown RBP14.24□□□□□ -0.13
RNF4-215ENST00000511843 FAM160A1Q05DH4 1040 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 BIRC3Q13489 604 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 KCNB1Q14721 858 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 DDR2Q16832 855 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 LIMS2Q7Z4I7 341 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 SLC9A9Q8IVB4 645 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 PARD3BQ8TEW8 1205 aa14.24□□□□□ -0.13
RNF4-215ENST00000511843 RSPRY1Q96DX4 576 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms