RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	DSC1	Q08554	894 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	MORC3	Q14149	939 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	EDRF1	Q3B7T1	1238 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	SLC10A6	Q3KNW5	377 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	LAIR1	Q6GTX8	287 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	CENPP	Q6IPU0	288 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	GPD1L	Q8N335	351 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	XXYLT1	Q8NBI6	393 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	GLIS3	Q8NEA6	775 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	AUTS2	Q8WXX7	1259 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	UROC1	Q96N76	676 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	ZNF558	Q96NG5	402 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	APOL6	Q9BWW8	343 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	HAPLN2	Q9GZV7	340 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	NRDE2	Q9H7Z3	1164 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	SLC2A4RG	Q9NR83	387 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	AGPAT3	Q9NRZ7	376 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	DMAC2	Q9NW81	257 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	EPS15L1	Q9UBC2	864 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	MTF2	Q9Y483	593 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	MYH11	P35749	1972 aa		11.12	□□□□□ -0.63
PTPN20-222	ENST00000509774	SMIM28	A0A1B0GU29	152 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	PTGES	O14684	152 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	POMC	P01189	267 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	GALT	P07902	379 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	GBP2	P32456	591 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	CA8	P35219	290 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	PRCP	P42785	496 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	SCNN1G	P51170	649 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	LRRC63	Q05C16	580 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	PPP2R3A	Q06190	1150 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	ENPEP	Q07075	957 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	TUSC3	Q13454	348 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	BMS1	Q14692	1282 aa	Known RBP	11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	CSRP2	Q16527	193 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	CAMK4	Q16566	473 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	NELFCD	Q8IXH7	590 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	COLGALT2	Q8IYK4	626 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	SLC39A11	Q8N1S5	342 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	CEP120	Q8N960	986 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	MLKL	Q8NB16	471 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	GPT2	Q8TD30	523 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	SYAP1	Q96A49	352 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	ZFP42	Q96MM3	310 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	PPP1R10	Q96QC0	940 aa	Known RBP	11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	MYADM	Q96S97	322 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	CBWD1	Q9BRT8	395 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	DDX23	Q9BUQ8	820 aa	Known RBP	11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	COLEC11	Q9BWP8	271 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	MIOS	Q9NXC5	875 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	HSPBP1	Q9NZL4	362 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	MAN1B1	Q9UKM7	699 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	INPP5F	Q9Y2H2	1132 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	FAN1	Q9Y2M0	1017 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	C2CD2	Q9Y426	696 aa		11.11	□□□□□ -0.63
PTPN20-222	ENST00000509774	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	KANSL1L	A0AUZ9	987 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	LACTBL1	A8MY62	500 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	PSMA7	O14818	248 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	DDHD2	O94830	711 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	RET	P07949	1114 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	HARS	P12081	509 aa	Known RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	ACOT2	P49753	483 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	AFF1	P51825	1210 aa	Known RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	BCAR1	P56945	870 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	MCCD1	P59942	119 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	OSTN	P61366	133 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	NAB2	Q15742	525 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	ZBTB6	Q15916	424 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	ENOX2	Q16206	610 aa	Known RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	IL31	Q6EBC2	164 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	RBM43	Q6ZSC3	357 aa	Known RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	USP37	Q86T82	979 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	ZNF280B	Q86YH2	543 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	BRSK2	Q8IWQ3	736 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	GPR65	Q8IYL9	337 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	CACTIN	Q8WUQ7	758 aa	Known RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	NXPE3	Q969Y0	559 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	TSG101	Q99816	390 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	FAM213A	Q9BRX8	229 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	ZBP1	Q9H171	429 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	PRMT8	Q9NR22	394 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	KLK14	Q9P0G3	267 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	UBQLN1	Q9UMX0	589 aa	Known RBP	11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	FRMD4B	Q9Y2L6	1034 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	IRAK3	Q9Y616	596 aa		11.1	□□□□□ -0.63
PTPN20-222	ENST00000509774	BICDL2	A1A5D9	508 aa		11.09	□□□□□ -0.63
PTPN20-222	ENST00000509774	TMEM8B	A6NDV4	472 aa		11.09	□□□□□ -0.63
PTPN20-222	ENST00000509774	TISP43	B9A030	160 aa		11.09	□□□□□ -0.63
PTPN20-222	ENST00000509774	TMEM189-UBE2V1	I3L0A0	370 aa		11.09	□□□□□ -0.63
PTPN20-222	ENST00000509774	NRP1	O14786	923 aa		11.09	□□□□□ -0.63
PTPN20-222	ENST00000509774	EXOC3	O60645	756 aa		11.09	□□□□□ -0.63
PTPN20-222	ENST00000509774	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
PTPN20-222	ENST00000509774	LETM1	O95202	739 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN20-222	ENST00000509774	CXCL8	P10145	99 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms