RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 ASIC1P78348 528 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 GTF2BQ00403 316 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 GPR17Q13304 367 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 FZD5Q13467 585 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 ZNF528Q3MIS6 628 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 FOXR2Q6PJQ5 311 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 VITQ6UXI7 678 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 LUZP1Q86V48 1076 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 MAP4K3Q8IVH8 894 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 CD302Q8IX05 232 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 TRMT61BQ9BVS5 477 aaKnown RBP15.76■□□□□ 0.11
HMGCL-208ENST00000509389 LRRC3Q9BY71 257 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 HSD3B7Q9H2F3 369 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 MRPS17Q9Y2R5 130 aaKnown RBP15.76■□□□□ 0.11
HMGCL-208ENST00000509389 SCN1AP35498 2009 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 ANKRD63C9JTQ0 380 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 SPTLC1O15269 473 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 NCAM2O15394 837 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TBCAO75347 108 aaKnown RBP15.75■□□□□ 0.11
HMGCL-208ENST00000509389 PSMC3P17980 439 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TYMPP19971 482 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 PPP1R2P41236 205 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 VIPR2P41587 438 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 RPS9P46781 194 aaKnown RBP15.75■□□□□ 0.11
HMGCL-208ENST00000509389 ID4P47928 161 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 LILRA4P59901 499 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 CSTF1Q05048 431 aaKnown RBP15.75■□□□□ 0.11
HMGCL-208ENST00000509389 DUSP4Q13115 394 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TEAD2Q15562 447 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 ZC2HC1CQ53FD0 456 aaPredicted RBP15.75■□□□□ 0.11
HMGCL-208ENST00000509389 OVOS1Q6IE37 1185 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 KIAA0895Q8NCT3 520 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 SHKBP1Q8TBC3 707 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 ZSCAN18Q8TBC5 510 aaPredicted RBP15.75■□□□□ 0.11
HMGCL-208ENST00000509389 IRF7Q92985 503 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 SENP8Q96LD8 212 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TRPV4Q9HBA0 871 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 ZNF334Q9HCZ1 680 aaPredicted RBP15.75■□□□□ 0.11
HMGCL-208ENST00000509389 GPR179Q6PRD1 2367 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 NCANO14594 1321 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TSC2P49815 1807 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TISP43B9A030 160 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 NFICP08651 508 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 GDI1P31150 447 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 ABCD1P33897 745 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 ACOT2P49753 483 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 MYL5Q02045 173 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 PSMD2Q13200 908 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 PLD1Q13393 1074 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 MYBPC2Q14324 1141 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 C9orf57Q5W0N0 161 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 CENPPQ6IPU0 288 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TMC8Q8IU68 726 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 ZNF687Q8N1G0 1237 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 SUMF1Q8NBK3 374 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 ENOX1Q8TC92 643 aaKnown RBP15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TMEM209Q96SK2 561 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 TRPV5Q9NQA5 729 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 EXOC1Q9NV70 894 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 SLC27A5Q9Y2P5 690 aa15.75■□□□□ 0.11
HMGCL-208ENST00000509389 A0A1W2PRU2 124 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 ANO9A1A5B4 782 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 MTMR11A4FU01 709 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 PIRO00625 290 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 MAN2B1O00754 1011 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 ODC1P11926 461 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 PAX3P23760 479 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 ALDH1A3P47895 512 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 EPHB3P54753 998 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 FOXK2Q01167 660 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 STK4Q13043 487 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 TMEM132DQ14C87 1099 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 ISM2Q6H9L7 571 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 SARM1Q6SZW1 724 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 MFSD6LQ8IWD5 586 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 KIAA2013Q8IYS2 634 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 AOPEPQ8N6M6 819 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 ATAD1Q8NBU5 361 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 DEPDC1BQ8WUY9 529 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 CCDC47Q96A33 483 aaKnown RBP15.74■□□□□ 0.11
HMGCL-208ENST00000509389 GPR88Q9GZN0 384 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 IKZF4Q9H2S9 585 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 ST6GALNAC4Q9H4F1 302 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 SLITRK6Q9H5Y7 841 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 OLFML3Q9NRN5 406 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 NDRG2Q9UN36 371 aaKnown RBP15.74■□□□□ 0.11
HMGCL-208ENST00000509389 DERAQ9Y315 318 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 STYXL1Q9Y6J8 313 aa15.74■□□□□ 0.11
HMGCL-208ENST00000509389 HEPACAM2A8MVW5 462 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 ZNF263O14978 683 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 CYP11A1P05108 521 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 PRCPP42785 496 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 SLFN12LQ6IEE8 588 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 ARMCX5Q6P1M9 558 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 TSSK4Q6SA08 328 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 DYMQ7RTS9 669 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 ZNF720Q7Z2F6 126 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 CCDC65Q8IXS2 484 aa15.73■□□□□ 0.11
HMGCL-208ENST00000509389 SMYD4Q8IYR2 804 aaPredicted RBP15.73■□□□□ 0.11
HMGCL-208ENST00000509389 GUF1Q8N442 669 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms