RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CDC42EP1Q00587 391 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 SP4Q02446 784 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 ITGA7Q13683 1181 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 KIR3DS1Q14943 382 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 SNX17Q15036 470 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 PLCB4Q15147 1175 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 IL17AQ16552 155 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 RESP18Q5W5W9 173 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 KIAA1211LQ6NV74 962 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 TAF2Q6P1X5 1199 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 SLC39A5Q6ZMH5 540 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 ANKRD33Q7Z3H0 272 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 UBE2Q1Q7Z7E8 422 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 CABP7Q86V35 215 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 CATSPER3Q86XQ3 398 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 TPH2Q8IWU9 490 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 NME8Q8N427 588 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 C7orf31Q8N865 590 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 LINC01599Q8WXQ3 324 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 GJA10Q969M2 543 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 DYDC2Q96IM9 177 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 MCMBPQ9BTE3 642 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 HTATIP2Q9BUP3 242 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 TIPINQ9BVW5 301 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 FTOQ9C0B1 505 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 LRRC27Q9C0I9 530 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 SENP6Q9GZR1 1112 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 CSRNP2Q9H175 543 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 MAGEF1Q9HAY2 307 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 C17orf102A2RUQ5 167 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 MBLAC1A4D2B0 266 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 ENPP3O14638 875 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 ASAP2O43150 1006 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 CAND2O75155 1236 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 MED24O75448 989 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 STBD1O95210 358 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 PARNO95453 639 aaKnown RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 EYA4O95677 639 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 MYL1P05976 194 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 ZNF286BP0CG31 522 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 SMIM10L2AP0DMW4 78 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 SMIM10L2BP0DMW5 78 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 EN2P19622 333 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 SCP2P22307 547 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 RPL10P27635 214 aaKnown RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 TMOD1P28289 359 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 YWHABP31946 246 aaKnown RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 DNM2P50570 870 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 UBE2HP62256 183 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 ADAM17P78536 824 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 AMPD3Q01432 767 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 PRKCEQ02156 737 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 PPFIA1Q13136 1202 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 CTTNQ14247 550 aaKnown RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 TARBP2Q15633 366 aaKnown RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 SLC10A6Q3KNW5 377 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 MTERF2Q49AM1 385 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 TMEM119Q4V9L6 283 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 RTP2Q5QGT7 225 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 RRAGBQ5VZM2 374 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 SDE2Q6IQ49 451 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 RPAINQ86UA6 219 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 IQUBQ8NA54 791 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 TMEM52Q8NDY8 209 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 MCPH1Q8NEM0 835 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 ADCY4Q8NFM4 1077 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 RASSF8Q8NHQ8 419 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 TCP11Q8WWU5 503 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 FAM168AQ92567 244 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 LIN37Q96GY3 246 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 PAWRQ96IZ0 340 aaKnown RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 CCDC43Q96MW1 224 aaKnown RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 CLIC6Q96NY7 704 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 UIMC1Q96RL1 719 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 MMTAG2Q9BU76 263 aaKnown RBP6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 KLHL25Q9H0H3 589 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 RNPEPQ9H4A4 650 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 CYP26B1Q9NR63 512 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 PRR13Q9NZ81 148 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 RGL1Q9NZL6 768 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 HDAC6Q9UBN7 1215 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 PCDHA2Q9Y5H9 948 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 PDE4DIPQ5VU43 2346 aa6.07□□□□□ -1.44
HMGB1P44-201ENST00000508597 CEP290O15078 2479 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 GRIN2DO15399 1336 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 MYH11P35749 1972 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 IGKV6-21A0A0C4DH24 114 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 SMIM35A0A1B0GVV1 85 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 ANKRD34BA5PLL1 514 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 ARHGEF35A5YM69 484 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 MAFO75444 373 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 CD4P01730 458 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 HPXP02790 462 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 INSRRP14616 1297 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 VAV1P15498 845 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 PTGS1P23219 599 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 ABCD1P33897 745 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 SYKP43405 635 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 RARRES1P49788 294 aa6.06□□□□□ -1.44
HMGB1P44-201ENST00000508597 CYP4A11Q02928 519 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms