RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 C2orf15Q8WU43 125 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 ZFYVE19Q96K21 471 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 LRRC3BQ96PB8 259 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 GCNAQ96QF7 691 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 USP28Q96RU2 1077 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 FAM126AQ9BYI3 521 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 FGFBP2Q9BYJ0 223 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 EPC1Q9H2F5 836 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 TASP1Q9H6P5 420 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 ZNF292O60281 2723 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 A0A087X0B3 334 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 SPECC1L-ADORA2AF8WAN1 911 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 ITGB3P05106 788 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 CDC25CP30307 473 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 CTHP32929 405 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 PNPLA4P41247 253 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 MLLT6P55198 1093 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 TFAMQ00059 246 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 SATB1Q01826 763 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 PPP2R5DQ14738 602 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 TAF12Q16514 161 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 ARHGAP29Q52LW3 1261 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 DCP1BQ8IZD4 617 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 SYCP3Q8IZU3 236 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 BPIFB1Q8TDL5 484 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 FAM84AQ96KN4 292 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 PANK2Q9BZ23 570 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 SMG9Q9H0W8 520 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 C8orf33Q9H7E9 229 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 OLFML3Q9NRN5 406 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 RBM12Q9NTZ6 932 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 TMLHEQ9NVH6 421 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 OBP2AQ9NY56 170 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 RBAKQ9NYW8 714 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 GTSE1Q9NYZ3 720 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 AGAP1Q9UPQ3 857 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 MTMR6Q9Y217 621 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 HELZP42694 1942 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 GREB1Q4ZG55 1949 aa12.44□□□□□ -0.42
HMGCS1-204ENST00000507293 ANAPC1Q9H1A4 1944 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 FRMD3A2A2Y4 597 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 MYBPHLA2RUH7 354 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 GARTP22102 1010 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 WEE1P30291 646 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 GPR15P49685 360 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 TSPY1Q01534 308 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 SMARCB1Q12824 385 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 BFSP1Q12934 665 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 ALCAMQ13740 583 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 LRRC32Q14392 662 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 GAS6Q14393 721 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 SLC39A14Q15043 492 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 WDR44Q5JSH3 913 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 SCARA3Q6AZY7 606 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 C1orf228Q6PIY5 440 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 TXNDC11Q6PKC3 985 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 MAMSTRQ6ZN01 415 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 Q6ZS52 159 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 DGLUCYQ7Z3D6 616 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 STKLD1Q8NE28 680 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 SECISBP2LQ93073 1101 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 CBWD1Q9BRT8 395 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 PI4K2AQ9BTU6 479 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 SLC46A2Q9BY10 475 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 PCIF1Q9H4Z3 704 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 PANK4Q9NVE7 773 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 L1RE1Q9UN81 338 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 PCDHB5Q9Y5E4 795 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 MORC2Q9Y6X9 1032 aaPredicted RBP12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 PTPRDP23468 1912 aa12.43□□□□□ -0.42
HMGCS1-204ENST00000507293 DMDP11532 3685 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 GPR179Q6PRD1 2367 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 KIAA1549LQ6ZVL6 1849 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 PRPF40AO75400 957 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 PRPF6O94906 941 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 KRT19P08727 400 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 ACAT1P24752 427 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 CXCL12P48061 93 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 NRLP54845 237 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 TNK2Q07912 1038 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 PUM1Q14671 1186 aaKnown RBP eCLIP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 PON2Q15165 354 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 TMEM150AQ86TG1 271 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 RALGPS2Q86X27 583 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 SPEM1Q8N4L4 309 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 PDILTQ8N807 584 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 PDE11AQ9HCR9 933 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 DDX43Q9NXZ2 648 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 MYO16Q9Y6X6 1858 aa12.42□□□□□ -0.42
HMGCS1-204ENST00000507293 RALGAPA1Q6GYQ0 2036 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms