RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 BAP1Q92560 729 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 UROC1Q96N76 676 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 GCNAQ96QF7 691 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 LNPKQ9C0E8 428 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 ECT2Q9H8V3 914 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 TOR4AQ9NXH8 423 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 MMP17Q9ULZ9 603 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 CCL26Q9Y258 94 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 USP20Q9Y2K6 914 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 CNTNAP5Q8WYK1 1306 aa7.92□□□□□ -1.14
VCAN-207ENST00000507162 FAM205CA6NFA0 338 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 hCG_1984214I3L0E3 225 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 K7EQS6 105 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 N4BP3O15049 544 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 EDIL3O43854 480 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 P4HBP07237 508 aaKnown RBP7.91□□□□□ -1.14
VCAN-207ENST00000507162 JUPP14923 745 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 MAOBP27338 520 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 WEE1P30291 646 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 ADSSP30520 456 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 YWHABP31946 246 aaKnown RBP7.91□□□□□ -1.14
VCAN-207ENST00000507162 MCM5P33992 734 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 EMP3P54852 163 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 RHDQ02161 417 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 POU5F1BQ06416 359 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 NR1H3Q13133 447 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 PDGFRLQ15198 375 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 ARHGAP40Q5TG30 622 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 DHRS13Q6UX07 377 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 SLC36A4Q6YBV0 504 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 ITIH5Q86UX2 942 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 CMTM8Q8IZV2 173 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 ALLCQ8N6M5 410 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 ZNF713Q8N859 430 aaPredicted RBP7.91□□□□□ -1.14
VCAN-207ENST00000507162 TRIML1Q8N9V2 468 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 ATAD1Q8NBU5 361 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 APPL2Q8NEU8 664 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 USP13Q92995 863 aaPredicted RBP7.91□□□□□ -1.14
VCAN-207ENST00000507162 NXPE2Q96DL1 559 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 TMEM87BQ96K49 555 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 PPP1R10Q96QC0 940 aaKnown RBP7.91□□□□□ -1.14
VCAN-207ENST00000507162 CDC6Q99741 560 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 CRISPLD1Q9H336 500 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 IL21RQ9HBE5 538 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 DUS2Q9NX74 493 aaKnown RBP7.91□□□□□ -1.14
VCAN-207ENST00000507162 WRAP73Q9P2S5 460 aaPredicted RBP7.91□□□□□ -1.14
VCAN-207ENST00000507162 ANKMY1Q9P2S6 941 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 PPME1Q9Y570 386 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 ASB3Q9Y575 518 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 PAXBP1Q9Y5B6 917 aa7.91□□□□□ -1.14
VCAN-207ENST00000507162 HEMK1Q9Y5R4 338 aaPredicted RBP7.91□□□□□ -1.14
VCAN-207ENST00000507162 SMIM28A0A1B0GU29 152 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 A0A1W2PQD8 194 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 TCRBV21S2A2A0A5A6 115 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 LRRIQ4A6NIV6 560 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 ENO4A6NNW6 628 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 E9PAM4 449 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 GNSP15586 552 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 GLRA2P23416 452 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 GNA11P29992 359 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 MCM4P33991 863 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 LIFRP42702 1097 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 IFNAR2P48551 515 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 USP11P51784 963 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 SOX4Q06945 474 aaPredicted RBP7.9□□□□□ -1.14
VCAN-207ENST00000507162 KCNH2Q12809 1159 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 GRIK2Q13002 908 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 RTN1Q16799 776 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 C4orf17Q53FE4 359 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 EMC10Q5UCC4 262 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 MAEAQ7L5Y9 396 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 DDX12PQ92771 950 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 PSMG2Q969U7 264 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 WBP1Q96G27 269 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 NAF1Q96HR8 494 aaKnown RBP7.9□□□□□ -1.14
VCAN-207ENST00000507162 HSPA12BQ96MM6 686 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 LPIN3Q9BQK8 851 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 ADPGKQ9BRR6 497 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 PI4K2AQ9BTU6 479 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 PDZD7Q9H5P4 517 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 FAM124BQ9H5Z6 455 aaPredicted RBP7.9□□□□□ -1.14
VCAN-207ENST00000507162 GAREM1Q9H706 876 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 XPNPEP1Q9NQW7 623 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 TDP1Q9NUW8 608 aa7.9□□□□□ -1.14
VCAN-207ENST00000507162 RBM28Q9NW13 759 aaKnown RBP7.9□□□□□ -1.14
VCAN-207ENST00000507162 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.9□□□□□ -1.14
VCAN-207ENST00000507162 TIMM13Q9Y5L4 95 aaPredicted RBP7.9□□□□□ -1.14
VCAN-207ENST00000507162 C2CD3Q4AC94 2353 aa7.9□□□□□ -1.15
VCAN-207ENST00000507162 UTP20O75691 2785 aaKnown RBP7.89□□□□□ -1.15
VCAN-207ENST00000507162 SGK1O00141 431 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 VNN2O95498 520 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 GP1BBP13224 206 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 CDC25CP30307 473 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 ARL2P36404 184 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 CLDN6P56747 220 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 TLE3Q04726 772 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 FUT2Q10981 343 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 MYO1EQ12965 1108 aa7.89□□□□□ -1.15
VCAN-207ENST00000507162 PRPF4BQ13523 1007 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms