RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 KRT17Q04695 432 aa7.73□□□□□ -1.17
TNPO1-204ENST00000506351 DHX9Q08211 1270 aaKnown RBP7.73□□□□□ -1.17
TNPO1-204ENST00000506351 INCA1Q0VD86 236 aa7.73□□□□□ -1.17
TNPO1-204ENST00000506351 HIC1Q14526 733 aa7.73□□□□□ -1.17
TNPO1-204ENST00000506351 CCL14Q16627 93 aa7.73□□□□□ -1.17
TNPO1-204ENST00000506351 APBB1IPQ7Z5R6 666 aaPredicted RBP7.73□□□□□ -1.17
TNPO1-204ENST00000506351 NIPA2Q8N8Q9 360 aa7.73□□□□□ -1.17
TNPO1-204ENST00000506351 KIF12Q96FN5 646 aa7.73□□□□□ -1.17
TNPO1-204ENST00000506351 PARP2Q9UGN5 583 aa7.73□□□□□ -1.17
TNPO1-204ENST00000506351 DERAQ9Y315 318 aa7.73□□□□□ -1.17
TNPO1-204ENST00000506351 HAS3O00219 553 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 MICAL2O94851 1124 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ITGBL1O95965 494 aaPredicted RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 KRT1P04264 644 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 CYP2C9P11712 490 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 TCF4P15884 667 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 HOXA11P31270 313 aaPredicted RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 SSR1P43307 286 aaKnown RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ZNF157P51786 506 aaPredicted RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 IRX5P78411 483 aaPredicted RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 RBP5P82980 135 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ZNF844Q08AG5 666 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 SNX1Q13596 522 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 PTK6Q13882 451 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 CEP85LQ5SZL2 805 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 SLC27A1Q6PCB7 646 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 DCUN1D2Q6PH85 259 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 CATSPER4Q7RTX7 472 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ANKS1BQ7Z6G8 1248 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 FBXO25Q8TCJ0 367 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ATG4AQ8WYN0 398 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 TMEM176AQ96HP8 235 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 OSMRQ99650 979 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 EIF2AQ9BY44 585 aaKnown RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 FAM124BQ9H5Z6 455 aaPredicted RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 CDHR5Q9HBB8 845 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 TMBIM4Q9HC24 238 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 KLHL11Q9NVR0 708 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 TJP2Q9UDY2 1190 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 R3HDM2Q9Y2K5 976 aaKnown RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 TSC2P49815 1807 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 SHOX2O60902 331 aaPredicted RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ERBB2P04626 1255 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 DARSP14868 501 aaKnown RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 CAPN2P17655 700 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 PLTPP55058 493 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ADAM17P78536 824 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 CDC42EP1Q00587 391 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 PIGHQ14442 188 aaPredicted RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 PPP1R7Q15435 360 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 LRRC38Q5VT99 294 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 SYDE1Q6ZW31 735 aaPredicted RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 SH2D3CQ8N5H7 860 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 OR2W6PQ8NHA6 318 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 GRK7Q8WTQ7 553 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ART4Q93070 314 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 RBM41Q96IZ5 413 aaKnown RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 SLITRK1Q96PX8 696 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 APBA2Q99767 749 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 OSBPL8Q9BZF1 889 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 FAM129AQ9BZQ8 928 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 CXCL16Q9H2A7 254 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 PLEKHA5Q9HAU0 1116 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 NMRK2Q9NPI5 230 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 SNTG2Q9NY99 539 aa7.72□□□□□ -1.17
TNPO1-204ENST00000506351 ZNF638Q14966 1978 aaKnown RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 TDRD15B5MCY1 1934 aaKnown RBP7.72□□□□□ -1.17
TNPO1-204ENST00000506351 GOLGA8SH3BPF8 625 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 M0QYV0 167 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 IGHA2P01877 340 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 MYL3P08590 195 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 VDRP11473 427 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 RGS2P41220 211 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 CPT1AP50416 773 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 PCBP1Q15365 356 aaKnown RBP eCLIP7.71□□□□□ -1.17
TNPO1-204ENST00000506351 NOTUMQ6P988 496 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 C17orf99Q6UX52 265 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 XYLT1Q86Y38 959 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 ATP6V1G3Q96LB4 118 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 CPXM1Q96SM3 734 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 HEMGNQ9BXL5 484 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 EPB41L4BQ9H329 900 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 BARX2Q9UMQ3 279 aaPredicted RBP7.71□□□□□ -1.17
TNPO1-204ENST00000506351 GINS2Q9Y248 185 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 ATP8A1Q9Y2Q0 1164 aa7.71□□□□□ -1.17
TNPO1-204ENST00000506351 SIGLEC16A6NMB1 481 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 HMGB1P1B2RPK0 211 aaPredicted RBP7.71□□□□□ -1.18
TNPO1-204ENST00000506351 F8VP50 259 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 CYP2B6P20813 491 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 CYP3A5P20815 502 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 PTPN7P35236 360 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 NDST1P52848 882 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 PMS2P54278 862 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 PSMC1P62191 440 aaKnown RBP7.71□□□□□ -1.18
TNPO1-204ENST00000506351 SKOR1P84550 965 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 KCTD16Q68DU8 428 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 IFNL1Q8IU54 200 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 RCOR2Q8IZ40 523 aa7.71□□□□□ -1.18
TNPO1-204ENST00000506351 TTC39CQ8N584 583 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms