RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 RBBP8NLQ8NC74 664 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 CCDC112Q8NEF3 446 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 OLIG1Q8TAK6 271 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 HASPINQ8TF76 798 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 BCL7CQ8WUZ0 217 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 DDX1Q92499 740 aaKnown RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 TMEM176AQ96HP8 235 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 SAMD11Q96NU1 681 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 ACBD6Q9BR61 282 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 MRPL45Q9BRJ2 306 aaKnown RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 SYT11Q9BT88 431 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 PLVAPQ9BX97 442 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 NT5C1AQ9BXI3 368 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 OXCT2Q9BYC2 517 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 ELOVL4Q9GZR5 314 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 CHST7Q9NS84 486 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 SPG21Q9NZD8 308 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 ARHGAP20Q9P2F6 1191 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 KIAA1257Q9ULG3 409 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 STXBP5LQ9Y2K9 1186 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 PRG3Q9Y2Y8 225 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 PCDHB12Q9Y5F1 795 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 SF3B1O75533 1304 aaKnown RBP eCLIP7.68□□□□□ -1.18
NUP54-204ENST00000506098 LCHNA4D1U4 455 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 A8MXQ7 604 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 I3L4J1 428 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 TBC1D4O60343 1298 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 SOD2P04179 222 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 RB1P06400 928 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 VDRP11473 427 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 KRT5P13647 590 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 CYP11B1P15538 503 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 CD58P19256 250 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 LMO2P25791 158 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 ANXA13P27216 316 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 TKTP29401 623 aaKnown RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 BMPR1AP36894 532 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 PBX3P40426 434 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 CCZ1BP86790 482 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 CCZ1P86791 482 aaPredicted RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 KLHL30Q0D2K2 578 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 STILQ15468 1287 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 USP41Q3LFD5 358 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 HS1BP3Q53T59 392 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 SPOUT1Q5T280 376 aaKnown RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 FAM171A1Q5VUB5 890 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 FAM109BQ6ICB4 259 aaPredicted RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 OVOS1Q6IE37 1185 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 FAM171BQ6P995 826 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 CYP26C1Q6V0L0 522 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 DDX53Q86TM3 631 aaKnown RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 SLC47A2Q86VL8 602 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 METTL23Q86XA0 190 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 CCDC170Q8IYT3 715 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 TDHQ8IZJ6 230 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 THEM5Q8N1Q8 247 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 OR6B3Q8NGW1 331 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 SLC30A5Q8TAD4 765 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 EPS8L1Q8TE68 723 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 ZNF606Q8WXB4 792 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 TMEM169Q96HH4 297 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 TNIP3Q96KP6 325 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 TWNKQ96RR1 684 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 PKMYT1Q99640 499 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 CHP1Q99653 195 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 BAG1Q99933 345 aaPredicted RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 RTP3Q9BQQ7 232 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 HERC2P3Q9BVR0 1158 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 VN1R3Q9BXE9 311 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 DNAI2Q9GZS0 605 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 SNX25Q9H3E2 840 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 HAUS4Q9H6D7 363 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 ZNHIT6Q9NWK9 470 aaKnown RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 DDX43Q9NXZ2 648 aaKnown RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 HMGXB4Q9UGU5 601 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 NOCTQ9UK39 431 aaKnown RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 CDH9Q9ULB4 789 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 PCDHGC3Q9UN70 934 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 LZTS1Q9Y250 596 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 CHD7Q9P2D1 2997 aa7.67□□□□□ -1.18
NUP54-204ENST00000506098 RANBP2P49792 3224 aaKnown RBP7.67□□□□□ -1.18
NUP54-204ENST00000506098 NUP210Q8TEM1 1887 aaPredicted RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 A0A1W2PPC1 479 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 GRXCR1A8MXD5 290 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 H7C4K7 107 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 LILRB3O75022 631 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 FGF18O76093 207 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 LCA5LO95447 670 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 PLEKP08567 350 aaPredicted RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 PDGFRBP09619 1106 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 SKILP12757 684 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 CHRNB2P17787 502 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 PTPN1P18031 435 aaKnown RBP7.66□□□□□ -1.18
NUP54-204ENST00000506098 PCSK1P29120 753 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 GNA15P30679 374 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 USP8P40818 1118 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 PDE6CP51160 858 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 RABGGTBP53611 331 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 ERVK-21P61565 698 aa7.66□□□□□ -1.18
NUP54-204ENST00000506098 FMO1Q01740 532 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms