RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 CBWD2Q8IUF1 395 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 CCDC65Q8IXS2 484 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 THEM5Q8N1Q8 247 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 GPD1LQ8N335 351 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 TTC8Q8TAM2 541 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 FAM200AQ8TCP9 573 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 DNASE1L2Q92874 299 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 ZNF396Q96N95 335 aaPredicted RBP13.78□□□□□ -0.2
RNF4-206ENST00000504782 PI4K2AQ9BTU6 479 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 OSBPL6Q9BZF3 934 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 BLZF1Q9H2G9 400 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 TNMDQ9H2S6 317 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 ABI2Q9NYB9 513 aaPredicted RBP13.78□□□□□ -0.2
RNF4-206ENST00000504782 ZNF263O14978 683 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 TGFB1I1O43294 461 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 CUTAO60888 179 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 PRAMEF12O95522 483 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 YEATS4O95619 227 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 LDHAP00338 332 aaKnown RBP13.77□□□□□ -0.21
RNF4-206ENST00000504782 F13A1P00488 732 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 KRT19P08727 400 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 ZSCAN22P10073 491 aaPredicted RBP13.77□□□□□ -0.21
RNF4-206ENST00000504782 ASIC1P78348 528 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 CSTF1Q05048 431 aaKnown RBP13.77□□□□□ -0.21
RNF4-206ENST00000504782 BFSP1Q12934 665 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 MTAPQ13126 283 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 GREB1Q4ZG55 1949 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 EPM2AIP1Q7L775 607 aaPredicted RBP13.77□□□□□ -0.21
RNF4-206ENST00000504782 GRAMD1CQ8IYS0 662 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 KCNG4Q8TDN1 519 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 IRF7Q92985 503 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 ZNF560Q96MR9 790 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 TMEM206Q9H813 350 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
RNF4-206ENST00000504782 HSFX1Q9UBD0 423 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 PCDHA7Q9UN72 937 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 ASB3Q9Y575 518 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 PIAS3Q9Y6X2 628 aa13.77□□□□□ -0.21
RNF4-206ENST00000504782 ANAPC1Q9H1A4 1944 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 CLIC2O15247 247 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 POLR2DO15514 142 aaKnown RBP13.76□□□□□ -0.21
RNF4-206ENST00000504782 LAMTOR5O43504 91 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 HMGA1P17096 107 aaKnown RBP13.76□□□□□ -0.21
RNF4-206ENST00000504782 CCNE1P24864 410 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 CYP2F1P24903 491 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 TUFMP49411 452 aaKnown RBP13.76□□□□□ -0.21
RNF4-206ENST00000504782 EHHADHQ08426 723 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 ALCAMQ13740 583 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 SOWAHAQ2M3V2 549 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 NELFCDQ8IXH7 590 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 RDH13Q8NBN7 331 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 ZNF507Q8TCN5 953 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 CACTINQ8WUQ7 758 aaKnown RBP13.76□□□□□ -0.21
RNF4-206ENST00000504782 DEPDC1BQ8WUY9 529 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 FAM3CQ92520 227 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 PKMYT1Q99640 499 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 C7orf25Q9BPX7 421 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 SLC46A2Q9BY10 475 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 GPR88Q9GZN0 384 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 TRPV5Q9NQA5 729 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 INTS13Q9NVM9 706 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 GTSE1Q9NYZ3 720 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 HSPBP1Q9NZL4 362 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 GTF3C4Q9UKN8 822 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 SNX9Q9Y5X1 595 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 PTPRDP23468 1912 aa13.76□□□□□ -0.21
RNF4-206ENST00000504782 SLC38A8A6NNN8 435 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 ATP2C2O75185 946 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 LMNAP02545 664 aaKnown RBP13.75□□□□□ -0.21
RNF4-206ENST00000504782 F11P03951 625 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 LMO2P25791 158 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 HOXC13P31276 330 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 PNPLA4P41247 253 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 AFMP43652 599 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 RPS9P46781 194 aaKnown RBP13.75□□□□□ -0.21
RNF4-206ENST00000504782 DNM1Q05193 864 aaKnown RBP13.75□□□□□ -0.21
RNF4-206ENST00000504782 TNK2Q07912 1038 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 FCHO2Q0JRZ9 810 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 CUL4BQ13620 913 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 DDR2Q16832 855 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 TXNDC11Q6PKC3 985 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 ITIH5Q86UX2 942 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 HSCBQ8IWL3 235 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 DCP1BQ8IZD4 617 aaKnown RBP13.75□□□□□ -0.21
RNF4-206ENST00000504782 IQUBQ8NA54 791 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 SUMF1Q8NBK3 374 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 RIN3Q8TB24 985 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 SPPL2BQ8TCT7 592 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 SCFD1Q8WVM8 642 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 NELL2Q99435 816 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 TASP1Q9H6P5 420 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 LMAN1LQ9HAT1 526 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 RBM12Q9NTZ6 932 aaKnown RBP13.75□□□□□ -0.21
RNF4-206ENST00000504782 GDAP2Q9NXN4 497 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 ITGA11Q9UKX5 1188 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 CCL26Q9Y258 94 aa13.75□□□□□ -0.21
RNF4-206ENST00000504782 NME7Q9Y5B8 376 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms