RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CGREF1Q99674 301 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 CINPQ9BW66 212 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SLITRK6Q9H5Y7 841 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.52□□□□□ -1.376e-9■■□□□ 13.9
CLCN3-204ENST00000504131 SLC12A4Q9UP95 1085 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 H7C1W4 665 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 AFPP02771 609 aaKnown RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 JUNDP17535 347 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 CD40LGP29965 261 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TTKP33981 857 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 IL12RB1P42701 662 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 GNAQP50148 359 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 EMC2Q15006 297 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 NKX1-1Q15270 411 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 ACCSLQ4AC99 568 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TAF1BQ53T94 588 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SCARA3Q6AZY7 606 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 KIAA1841Q6NSI8 718 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SCYL2Q6P3W7 929 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 NLRC3Q7RTR2 1065 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 C16orf62Q7Z3J2 963 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SLC9B2Q86UD5 537 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 FRS2Q8WU20 508 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SCFD2Q8WU76 684 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SCFD1Q8WVM8 642 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 PRCCQ92733 491 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 LLPHQ9BRT6 129 aaKnown RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SLC6A15Q9H2J7 730 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 UFSP2Q9NUQ7 469 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 DPP7Q9UHL4 492 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 BAIAP2Q9UQB8 552 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 PPIP5K2O43314 1243 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 CCDC130P13994 396 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 IL10P22301 178 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 BCAP31P51572 246 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 NPEPPSP55786 919 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 C21orf58P58505 322 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 PLCB3Q01970 1234 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 PDZK1Q5T2W1 519 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TBC1D9BQ66K14 1250 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 RINT1Q6NUQ1 792 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TRIM65Q6PJ69 517 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 C16orf59Q7L2K0 433 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TMC3Q7Z5M5 1100 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 MYCT1Q8N699 235 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 RELTQ969Z4 430 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 DGCR14Q96DF8 476 aaKnown RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 EYA3Q99504 573 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 ANTXR1Q9H6X2 564 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 NOC2LQ9Y3T9 749 aaKnown RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TBX22Q9Y458 520 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 CDC42BPAQ5VT25 1732 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 PHLPP2Q6ZVD8 1323 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 WDR19Q8NEZ3 1342 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 A0A1B0GVL5 298 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 CLRN2A0PK11 232 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 PIP5K1CO60331 668 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TLR2O60603 784 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TADA2AO75478 443 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 OAZ2O95190 189 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 ATXN8OSP0DMR3 200 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 ETF1P62495 437 aaKnown RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 APBA1Q02410 837 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 BTKQ06187 659 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 GPR162Q16538 588 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 UAP1L1Q3KQV9 507 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 C5orf22Q49AR2 442 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TCP11X2Q5H9J9 407 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SH3D19Q5HYK7 790 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 VARS2Q5ST30 1063 aaKnown RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 ATG14Q6ZNE5 492 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 Q6ZUG5 572 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 RRAGAQ7L523 313 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SSX9Q7RTT3 188 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 GALNT12Q8IXK2 581 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TTC29Q8NA56 475 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SLC10A4Q96EP9 437 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 PCDHGA8Q9Y5G5 932 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 ANKRD30BQ9BXX2 1392 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 TCOF1Q13428 1488 aaKnown RBP6.51□□□□□ -1.37
CLCN3-204ENST00000504131 TRAV20A0A0B4J274 112 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 CCNT1O60563 726 aaKnown RBP6.51□□□□□ -1.37
CLCN3-204ENST00000504131 APOL3O95236 402 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 GDF11O95390 407 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 GGPS1O95749 300 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 RECKO95980 971 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 DNTTP04053 509 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 TFPTP0C1Z6 253 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 EDN3P14138 238 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF18P17022 549 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 VHLP40337 213 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 GATMP50440 423 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 GRIN1Q05586 938 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 MXD4Q14582 209 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-204ENST00000504131 SETMARQ53H47 684 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-204ENST00000504131 MACC1Q6ZN28 852 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 SMIM15Q7Z3B0 74 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 TMC7Q7Z402 723 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 KIF18BQ86Y91 864 aa6.51□□□□□ -1.37
CLCN3-204ENST00000504131 SLC43A2Q8N370 569 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms