RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 HSFX1Q9UBD0 423 aa15.88■□□□□ 0.13
SEC61A1-207ENST00000498837 ANGPTL2Q9UKU9 493 aa15.88■□□□□ 0.13
SEC61A1-207ENST00000498837 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.88■□□□□ 0.13
SEC61A1-207ENST00000498837 OTOL1A6NHN0 477 aaPredicted RBP15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 PIRO00625 290 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 CYP11A1P05108 521 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 PMLP29590 882 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 CDC25CP30307 473 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 TUFMP49411 452 aaKnown RBP15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 TMEM196Q5HYL7 178 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 TRIM68Q6AZZ1 485 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 LRRTM3Q86VH5 581 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 CMTM8Q8IZV2 173 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 LOXL4Q96JB6 756 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 FAM83CQ9BQN1 747 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 ZCWPW1Q9H0M4 648 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 EBF3Q9H4W6 596 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 THG1LQ9NWX6 298 aaKnown RBP15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 TBX20Q9UMR3 447 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 CCL26Q9Y258 94 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 GON4LQ3T8J9 2241 aa15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 MYO18AQ92614 2054 aaKnown RBP15.87■□□□□ 0.13
SEC61A1-207ENST00000498837 A0A0B4J269 797 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 ANO9A1A5B4 782 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 H0YCG3 227 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 HNRNPDLO14979 420 aaKnown RBP15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 NFICP08651 508 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 CCDC192P0DO97 292 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 NMT1P30419 496 aaKnown RBP15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 RUNX3Q13761 415 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 VEPH1Q14D04 833 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 KYAT1Q16773 422 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 PLA2G2CQ5R387 149 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 STPG1Q5TH74 334 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 SLC39A4Q6P5W5 647 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 TMEM150AQ86TG1 271 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 MAB21L3Q8N8X9 362 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 ZSCAN31Q96LW9 406 aaPredicted RBP15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 TSPAN18Q96SJ8 248 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 REEP2Q9BRK0 252 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 MSTO1Q9BUK6 570 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 FBRSL1Q9HCM7 1045 aaKnown RBP15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 KCND2Q9NZV8 630 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 CPSF3Q9UKF6 684 aaKnown RBP15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 SLC8A2Q9UPR5 921 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 FAM208BQ5VWN6 2430 aa15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 ASCC3Q8N3C0 2202 aaKnown RBP15.86■□□□□ 0.13
SEC61A1-207ENST00000498837 CCDC163A0A0D9SF12 145 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 VWA3AA6NCI4 1184 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 TRDMT1O14717 391 aaKnown RBP15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 EGFP01133 1207 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 PIGRP01833 764 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 HAPLN1P10915 354 aaPredicted RBP15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 ATP2C1P98194 919 aaPredicted RBP15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 GRSF1Q12849 480 aaKnown RBP eCLIP15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 TMEM132DQ14C87 1099 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 PTPAQ15257 358 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 TAF12Q16514 161 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 TMEM119Q4V9L6 283 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 NAIF1Q69YI7 327 aaPredicted RBP15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 STKLD1Q8NE28 680 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 RIN3Q8TB24 985 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 LRRC15Q8TF66 581 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 KCNN1Q92952 543 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 USP13Q92995 863 aaPredicted RBP15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 CDK5RAP3Q96JB5 506 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 GCNAQ96QF7 691 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 CEP192Q8TEP8 1941 aa15.85■□□□□ 0.13
SEC61A1-207ENST00000498837 ANKRD63C9JTQ0 380 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 K7ENM7 598 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 CYB561D2O14569 222 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 ATG13O75143 517 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 RNF40O75150 1001 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 F11P03951 625 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 ARSAP15289 507 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 HMGA1P17096 107 aaKnown RBP15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 ACOT2P49753 483 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 NLRP12P59046 1061 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 DHX8Q14562 1220 aaKnown RBP15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 WSCD1Q658N2 575 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 METTL23Q86XA0 190 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 CD302Q8IX05 232 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 KCTD17Q8N5Z5 321 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 MYCT1Q8N699 235 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 ZC3H10Q96K80 434 aaKnown RBP15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 PYM1Q9BRP8 204 aaKnown RBP15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 SH2B1Q9NRF2 756 aaPredicted RBP15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 ABI2Q9NYB9 513 aaPredicted RBP15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 RALYQ9UKM9 306 aaKnown RBP15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 ODF2LQ9ULJ1 636 aa15.84■□□□□ 0.13
SEC61A1-207ENST00000498837 PCNX2A6NKB5 2137 aa15.83■□□□□ 0.13
SEC61A1-207ENST00000498837 TISP43B9A030 160 aa15.83■□□□□ 0.12
SEC61A1-207ENST00000498837 PAX3P23760 479 aa15.83■□□□□ 0.12
SEC61A1-207ENST00000498837 AVPR1AP37288 418 aa15.83■□□□□ 0.12
SEC61A1-207ENST00000498837 MPLP40238 635 aa15.83■□□□□ 0.12
SEC61A1-207ENST00000498837 GPR15P49685 360 aa15.83■□□□□ 0.12
SEC61A1-207ENST00000498837 GALK1P51570 392 aa15.83■□□□□ 0.12
SEC61A1-207ENST00000498837 SHC2P98077 582 aa15.83■□□□□ 0.12
SEC61A1-207ENST00000498837 PLK5Q496M5 336 aa15.83■□□□□ 0.12
SEC61A1-207ENST00000498837 TXNDC8Q6A555 127 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms