RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 MB21D1Q8N884 522 aa4.31□□□□□ -1.72
CALD1-224ENST00000498254 IPCEF1Q8WWN9 437 aaPredicted RBP4.31□□□□□ -1.72
CALD1-224ENST00000498254 SCAMP4Q969E2 229 aa4.31□□□□□ -1.72
CALD1-224ENST00000498254 RILPL2Q969X0 211 aa4.31□□□□□ -1.72
CALD1-224ENST00000498254 UBXN10Q96LJ8 280 aa4.31□□□□□ -1.72
CALD1-224ENST00000498254 ZSCAN31Q96LW9 406 aaPredicted RBP4.31□□□□□ -1.72
CALD1-224ENST00000498254 PRPF18Q99633 342 aaKnown RBP4.31□□□□□ -1.72
CALD1-224ENST00000498254 VKORC1Q9BQB6 163 aa4.31□□□□□ -1.72
CALD1-224ENST00000498254 CPPED1Q9BRF8 314 aaPredicted RBP4.31□□□□□ -1.72
CALD1-224ENST00000498254 LSM14BQ9BX40 385 aaKnown RBP4.31□□□□□ -1.72
CALD1-224ENST00000498254 GPR35Q9HC97 309 aa4.31□□□□□ -1.72
CALD1-224ENST00000498254 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
CALD1-224ENST00000498254 RGL1Q9NZL6 768 aa4.31□□□□□ -1.72
CALD1-224ENST00000498254 POGKQ9P215 609 aa4.31□□□□□ -1.72
CALD1-224ENST00000498254 SH3D21A4FU49 640 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 MROH6A6NGR9 719 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 TBKBP1A7MCY6 615 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 CLCA1A8K7I4 914 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 NCAM2O15394 837 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 PJA2O43164 708 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 USP1O94782 785 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 GYS1P13807 737 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 YY1P25490 414 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 CNTFP26441 200 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 ACVR2AP27037 513 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 AFF3P51826 1226 aaKnown RBP4.3□□□□□ -1.72
CALD1-224ENST00000498254 RAC3P60763 192 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 MXRA7P84157 204 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 NFYCQ13952 458 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 SLC29A2Q14542 456 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 CSRP2Q16527 193 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 BMT2Q1RMZ1 405 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 AMOTQ4VCS5 1084 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 NOMO2Q5JPE7 1267 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 CACHD1Q5VU97 1274 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 FAM160B1Q5W0V3 765 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 SPTY2D1Q68D10 685 aaPredicted RBP4.3□□□□□ -1.72
CALD1-224ENST00000498254 FAM111BQ6SJ93 734 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 TTLL10Q6ZVT0 673 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 PDSS2Q86YH6 399 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 ELOA2Q8IYF1 753 aaPredicted RBP4.3□□□□□ -1.72
CALD1-224ENST00000498254 SDR16C5Q8N3Y7 309 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 FITM2Q8N6M3 262 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 VGLL2Q8N8G2 317 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 FAM71BQ8TC56 605 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 MPP4Q96JB8 637 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 ZNF512Q96ME7 567 aaPredicted RBP4.3□□□□□ -1.72
CALD1-224ENST00000498254 SLC46A1Q96NT5 459 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 PCDHAC1Q9H158 963 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 ZHX3Q9H4I2 956 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 TM7SF3Q9NS93 570 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 MAP3K20Q9NYL2 800 aaKnown RBP4.3□□□□□ -1.72
CALD1-224ENST00000498254 RAPGEFL1Q9UHV5 662 aa4.3□□□□□ -1.72
CALD1-224ENST00000498254 LRRFIP2Q9Y608 721 aaKnown RBP4.3□□□□□ -1.72
CALD1-224ENST00000498254 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 PRR5-ARHGAP8B1AHC4 643 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 RFXAPO00287 272 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 AREL1O15033 823 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 IRAK2O43187 625 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 CNOT4O95628 575 aaKnown RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 A1BGP04217 495 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 POLBP06746 335 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 FCER1AP12319 257 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 PECAM1P16284 738 aaPredicted RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 TPH1P17752 444 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 GNAT2P19087 354 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 HK1P19367 917 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 BTF3P20290 206 aaKnown RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 TNFAIP3P21580 790 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 GLDCP23378 1020 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 PTDSS1P48651 473 aaKnown RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 CHN2P52757 468 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 GEMIN4P57678 1058 aaKnown RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 KRT17Q04695 432 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 BOP1Q14137 746 aaKnown RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 PTK2BQ14289 1009 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 PLA1AQ53H76 456 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 RAP1GAP2Q684P5 730 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 EFCAB12Q6NXP0 572 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 DBX2Q6ZNG2 339 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 MAATS1Q7Z4T9 603 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 ZNF280BQ86YH2 543 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 GALNT15Q8N3T1 639 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 DNERQ8NFT8 737 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 ZFP28Q8NHY6 868 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 CYP2W1Q8TAV3 490 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 DDX17Q92841 729 aaKnown RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 NEIL1Q96FI4 390 aaPredicted RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 SNX27Q96L92 541 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 OR14A2Q96R54 314 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 PPP1R9BQ96SB3 815 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 SPATA5L1Q9BVQ7 753 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 CPEB1Q9BZB8 566 aaKnown RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 EPS8L2Q9H6S3 715 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 MLXIPQ9HAP2 919 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 ZMYND8Q9ULU4 1186 aaPredicted RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 OAZ3Q9UMX2 235 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 SMG5Q9UPR3 1016 aaKnown RBP4.29□□□□□ -1.72
CALD1-224ENST00000498254 ATP11BQ9Y2G3 1177 aa4.29□□□□□ -1.72
CALD1-224ENST00000498254 PAXBP1Q9Y5B6 917 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms