RNA–Protein interactions for RNA: ENST00000498069.5

SCG5-208, Transcript of secretogranin V, human

TSL 2

Gene SCG5, Length 612 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCG5-208	ENST00000498069	ACAT1	P24752	427 aa	Known RBP	10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	ATIC	P31939	592 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	GNL1	P36915	607 aa	Predicted RBP	10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	CCR2	P41597	374 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	RPL10A	P62906	217 aa	Known RBP	10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	TNNC1	P63316	161 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	DPYD	Q12882	1025 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	SNW1	Q13573	536 aa	Known RBP	10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	TEAD2	Q15562	447 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	SOWAHA	Q2M3V2	549 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	SLC44A4	Q53GD3	710 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	ARHGAP15	Q53QZ3	475 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	FAM78A	Q5JUQ0	283 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	SCARA3	Q6AZY7	606 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	TANGO2	Q6ICL3	276 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	PHLDB3	Q6NSJ2	640 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	SLC9A9	Q8IVB4	645 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	TMEM105	Q8N8V8	129 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	KIAA0895	Q8NCT3	520 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	GIPC2	Q8TF65	315 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	SMARCD2	Q92925	531 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	E2F7	Q96AV8	911 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	FAM84A	Q96KN4	292 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	ZSWIM3	Q96MP5	696 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	GCNA	Q96QF7	691 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	PI4K2A	Q9BTU6	479 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	TRMT61B	Q9BVS5	477 aa	Known RBP	10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	DNAJC25	Q9H1X3	360 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	SNX25	Q9H3E2	840 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	KCTD10	Q9H3F6	313 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	GOLPH3L	Q9H4A5	285 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	ARHGEF3	Q9NR81	526 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	DMAC2	Q9NW81	257 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	HOOK1	Q9UJC3	728 aa	Known RBP	10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	GTF3C4	Q9UKN8	822 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	MYO7A	Q13402	2215 aa		10.88	□□□□□ -0.67
SCG5-208	ENST00000498069	PTPRJ	Q12913	1337 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	MUC3A	Q02505	3323 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	DPYSL4	O14531	572 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	GALR2	O43603	387 aa	Predicted RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	PI15	O43692	258 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	MOSPD3	O75425	235 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	NR3C1	P04150	777 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	PDGFRB	P09619	1106 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	PRR29	P0C7W0	189 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	AOC1	P19801	751 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	RPL13	P26373	211 aa	Known RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	GABRR2	P28476	465 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	CDC25C	P30307	473 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	BIRC3	Q13489	604 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	KCNB1	Q14721	858 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	MAPRE1	Q15691	268 aa	Known RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	WDR72	Q3MJ13	1102 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	INTS6L	Q5JSJ4	861 aa	Known RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	CEP135	Q66GS9	1140 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	C4orf50	Q6ZRC1	276 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	YAF2	Q8IY57	180 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	TTC9B	Q8N6N2	239 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	PRSS33	Q8NF86	280 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	OR6B3	Q8NGW1	331 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	SHKBP1	Q8TBC3	707 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	PARD3B	Q8TEW8	1205 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	TMEM174	Q8WUU8	243 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	ZNF516	Q92618	1163 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	SYAP1	Q96A49	352 aa	Predicted RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	ASB16	Q96NS5	453 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	LPIN3	Q9BQK8	851 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	LRRC3	Q9BY71	257 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	PLA2G2F	Q9BZM2	168 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	TBC1D17	Q9HA65	648 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	ABCB6	Q9NP58	842 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	RMND1	Q9NWS8	449 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	NXF1	Q9UBU9	619 aa	Known RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	CDH9	Q9ULB4	789 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	MAPK8IP1	Q9UQF2	711 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	TRAF3IP3	Q9Y228	551 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	SIT1	Q9Y3P8	196 aa		10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	TDRD15	B5MCY1	1934 aa	Known RBP	10.87	□□□□□ -0.67
SCG5-208	ENST00000498069	ZNF263	O14978	683 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	SMC2	O95347	1197 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	CSH1	P0DML2	217 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	CSH2	P0DML3	217 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	PSMC3	P17980	439 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	WARS	P23381	471 aa	Known RBP	10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	CYP2F1	P24903	491 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	LMO2	P25791	158 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	CASP4	P49662	377 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	STARD6	P59095	220 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	MYL6	P60660	151 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	NHLH1	Q02575	133 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	PRKCQ	Q04759	706 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	ADAM9	Q13443	819 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	GPR158	Q5T848	1215 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	TMC8	Q8IU68	726 aa		10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	GUF1	Q8N442	669 aa	Known RBP	10.86	□□□□□ -0.67
SCG5-208	ENST00000498069	TMC2	Q8TDI7	906 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms