RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 TDRD10Q5VZ19 366 aaKnown RBP12.08□□□□□ -0.48
ERCC8-208ENST00000497892 WSCD1Q658N2 575 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 TPGS2Q68CL5 300 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 ANKRD40Q6AI12 368 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 RTL10Q7L3V2 364 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 METTL23Q86XA0 190 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 ADHFE1Q8IWW8 467 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 TMEM86AQ8N2M4 240 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 PDCL2Q8N4E4 241 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 TOP6BLQ8N6T0 577 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 OR10T2Q8NGX3 314 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 SLC7A14Q8TBB6 771 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 SPATA18Q8TC71 538 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 ZNF707Q96C28 371 aaPredicted RBP12.08□□□□□ -0.48
ERCC8-208ENST00000497892 EEF2KMTQ96G04 330 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 RTP3Q9BQQ7 232 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 XYLT2Q9H1B5 865 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 L1RE1Q9UN81 338 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 R3HCC1Q9Y3T6 440 aaKnown RBP12.08□□□□□ -0.48
ERCC8-208ENST00000497892 SNX9Q9Y5X1 595 aa12.08□□□□□ -0.48
ERCC8-208ENST00000497892 CCDC195A0A1B0GUA6 201 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 HUS1O60921 280 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 CST3P01034 146 aaPredicted RBP12.07□□□□□ -0.48
ERCC8-208ENST00000497892 C4BPAP04003 597 aaKnown RBP12.07□□□□□ -0.48
ERCC8-208ENST00000497892 POU2F2P09086 479 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 HNRNPA1P09651 372 aaKnown RBP eCLIP12.07□□□□□ -0.48
ERCC8-208ENST00000497892 WEE2P0C1S8 567 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 KRT13P13646 458 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 ARPP19P56211 112 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 FKBP3Q00688 224 aaKnown RBP12.07□□□□□ -0.48
ERCC8-208ENST00000497892 GPR17Q13304 367 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 BIRC3Q13489 604 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 UVSSAQ2YD98 709 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 PPM1LQ5SGD2 360 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 ATAT1Q5SQI0 421 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 TTI2Q6NXR4 508 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 CCDC149Q6ZUS6 474 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 LIMS2Q7Z4I7 341 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 TCEAL8Q8IYN2 117 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 GPT2Q8TD30 523 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 PHF7Q9BWX1 381 aaPredicted RBP12.07□□□□□ -0.48
ERCC8-208ENST00000497892 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 POMKQ9H5K3 350 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 VRTNQ9H8Y1 702 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 AFF4Q9UHB7 1163 aaKnown RBP12.07□□□□□ -0.48
ERCC8-208ENST00000497892 MAFFQ9ULX9 164 aa12.07□□□□□ -0.48
ERCC8-208ENST00000497892 BICDL2A1A5D9 508 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 PRRG1O14668 218 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 PHACTR2O75167 634 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 SEC24AO95486 1093 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 VNN1O95497 513 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 VNN2O95498 520 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 OR4Q2P0C623 313 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 TRIM49P0CI25 452 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 TRIM49CP0CI26 452 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 EPB41P11171 864 aaKnown RBP12.06□□□□□ -0.48
ERCC8-208ENST00000497892 ATICP31939 592 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 MYL6P60660 151 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 COPS2P61201 443 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 PAK1Q13153 545 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 TRPC3Q13507 836 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 NCOA4Q13772 614 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 SOWAHAQ2M3V2 549 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 KLHL10Q6JEL2 608 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 RNF19BQ6ZMZ0 732 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 SV2AQ7L0J3 742 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 DPH6Q7L8W6 267 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 ADGRF2Q8IZF7 708 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 THEM5Q8N1Q8 247 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 NELFBQ8WX92 580 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 SMG7Q92540 1137 aaKnown RBP12.06□□□□□ -0.48
ERCC8-208ENST00000497892 SYAP1Q96A49 352 aaPredicted RBP12.06□□□□□ -0.48
ERCC8-208ENST00000497892 TMEM209Q96SK2 561 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 DUSP9Q99956 384 aaKnown RBP12.06□□□□□ -0.48
ERCC8-208ENST00000497892 PRR14Q9BWN1 585 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 ZCWPW1Q9H0M4 648 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 CYP4F11Q9HBI6 524 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 CTNND2Q9UQB3 1225 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 INSL5Q9Y5Q6 135 aa12.06□□□□□ -0.48
ERCC8-208ENST00000497892 DOCK6Q96HP0 2047 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 MTMR11A4FU01 709 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 LOC730098B7Z3J9 87 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 GABRDO14764 452 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 MBD3O95983 291 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 ELF1P32519 619 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 GTF2H1P32780 548 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 GCLMP48507 274 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 TNNC1P63316 161 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 PPP3CAQ08209 521 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 ADCY1Q08828 1119 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 ZNF699Q32M78 642 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 WDR72Q3MJ13 1102 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 GJD3Q8N144 294 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 KBTBD7Q8WVZ9 684 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 CEP63Q96MT8 703 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 PGLYRP2Q96PD5 576 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 WDR6Q9NNW5 1121 aaKnown RBP12.05□□□□□ -0.48
ERCC8-208ENST00000497892 CD320Q9NPF0 282 aa12.05□□□□□ -0.48
ERCC8-208ENST00000497892 DDX43Q9NXZ2 648 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms