RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SNX25Q9H3E2 840 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 CACNA1HO95180 2353 aa21.43■■□□□ 1.02
CTSD-206ENST00000497544 A0A1B0GTH6 734 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 FSCN2O14926 492 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 OAZ2O95190 189 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 TBXAS1P24557 533 aaPredicted RBP21.42■■□□□ 1.02
CTSD-206ENST00000497544 IRS1P35568 1242 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 LHX1P48742 406 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 CDH8P55286 799 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 CREMQ03060 361 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 MRPL58Q14197 206 aaKnown RBP21.42■■□□□ 1.02
CTSD-206ENST00000497544 PSMD5Q16401 504 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 CTXN3Q4LDR2 81 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 TRIM65Q6PJ69 517 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 PRSS55Q6UWB4 352 aaPredicted RBP21.42■■□□□ 1.02
CTSD-206ENST00000497544 PPM1KQ8N3J5 372 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 MRPL43Q8N983 215 aaKnown RBP21.42■■□□□ 1.02
CTSD-206ENST00000497544 OR6B3Q8NGW1 331 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 LNX1Q8TBB1 728 aaPredicted RBP21.42■■□□□ 1.02
CTSD-206ENST00000497544 PRRX2Q99811 253 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 CYP3A43Q9HB55 503 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.42■■□□□ 1.02
CTSD-206ENST00000497544 IFNKQ9P0W0 207 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 PRKAG3Q9UGI9 489 aa21.42■■□□□ 1.02
CTSD-206ENST00000497544 TEX33O43247 280 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 TACC1O75410 805 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 TPM3P06753 285 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 WEE2P0C1S8 567 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 WARSP23381 471 aaKnown RBP21.41■■□□□ 1.02
CTSD-206ENST00000497544 GNL1P36915 607 aaPredicted RBP21.41■■□□□ 1.02
CTSD-206ENST00000497544 NR1I3Q14994 352 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 PTPN14Q15678 1187 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 UVSSAQ2YD98 709 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 ZNF280DQ6N043 979 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 LIMS2Q7Z4I7 341 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 FAM81BQ96LP2 452 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 MRPL45Q9BRJ2 306 aaKnown RBP21.41■■□□□ 1.02
CTSD-206ENST00000497544 LSM14BQ9BX40 385 aaKnown RBP21.41■■□□□ 1.02
CTSD-206ENST00000497544 EMILIN2Q9BXX0 1053 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 OXCT2Q9BYC2 517 aaPredicted RBP21.41■■□□□ 1.02
CTSD-206ENST00000497544 SMYD3Q9H7B4 428 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 UBE2TQ9NPD8 197 aaPredicted RBP21.41■■□□□ 1.02
CTSD-206ENST00000497544 MUTYHQ9UIF7 546 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 IRAK3Q9Y616 596 aa21.41■■□□□ 1.02
CTSD-206ENST00000497544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.4■■□□□ 1.02
CTSD-206ENST00000497544 GABRDO14764 452 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 CBFA2T2O43439 604 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 LILRB3O75022 631 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 ASPAP45381 313 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 RAP1GAPP47736 663 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 CUL2Q13617 745 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 SYCP1Q15431 976 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 PHLDB3Q6NSJ2 640 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 RRAGAQ7L523 313 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 BMP8AQ7Z5Y6 402 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 ADHFE1Q8IWW8 467 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 ERGIC2Q96RQ1 377 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 BCO2Q9BYV7 579 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 RXFP1Q9HBX9 757 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 DDX43Q9NXZ2 648 aaKnown RBP21.4■■□□□ 1.02
CTSD-206ENST00000497544 FNIP2Q9P278 1114 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 BACE2Q9Y5Z0 518 aa21.4■■□□□ 1.02
CTSD-206ENST00000497544 C2orf71A6NGG8 1288 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 OR6C75A6NL08 312 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 MFAP3P55082 362 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 YWHAEP62258 255 aaKnown RBP21.39■■□□□ 1.01
CTSD-206ENST00000497544 ARHGEF19Q8IW93 802 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 PPP2R3CQ969Q6 453 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 KLHL5Q96PQ7 755 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 SDCBP2Q9H190 292 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 MTRRQ9UBK8 725 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 APEX2Q9UBZ4 518 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 PCDHGC5Q9Y5F6 944 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 DMDP11532 3685 aa21.39■■□□□ 1.01
CTSD-206ENST00000497544 HIDE1A8MVS5 230 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 A8MXQ7 604 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 CNPP09543 421 aaKnown RBP21.38■■□□□ 1.01
CTSD-206ENST00000497544 PDGFRBP09619 1106 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 RPL17P18621 184 aaKnown RBP21.38■■□□□ 1.01
CTSD-206ENST00000497544 CD58P19256 250 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 KLRC2P26717 231 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 PCSK1P29120 753 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 ARPP19P56211 112 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 GCNT1Q02742 428 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 ENOSF1Q7L5Y1 443 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 OSTM1Q86WC4 334 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 GLYCTKQ8IVS8 523 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 TTC39CQ8N584 583 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 NEK11Q8NG66 645 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 KBTBD7Q8WVZ9 684 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 ACBD6Q9BR61 282 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 DNAI2Q9GZS0 605 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 TLE6Q9H808 572 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 FBXL5Q9UKA1 691 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 SIK3Q9Y2K2 1263 aa21.38■■□□□ 1.01
CTSD-206ENST00000497544 TEX28O15482 410 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 TRIM21P19474 475 aaKnown RBP21.37■■□□□ 1.01
CTSD-206ENST00000497544 LMO2P25791 158 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 OR1D2P34982 312 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 TSPY1Q01534 308 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms