RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 PDGFRBP09619 1106 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 CCDC172P0C7W6 258 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 FECHP22830 423 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 TAP1Q03518 808 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 KRT17Q04695 432 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 EPS8L1Q8TE68 723 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 SAMD11Q96NU1 681 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 TGS1Q96RS0 853 aaKnown RBP19.47■□□□□ 0.71
RGP1-202ENST00000496906 DPEP3Q9H4B8 488 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 ZNHIT6Q9NWK9 470 aaKnown RBP19.47■□□□□ 0.71
RGP1-202ENST00000496906 STK39Q9UEW8 545 aa19.47■□□□□ 0.71
RGP1-202ENST00000496906 PTMAP06454 111 aaKnown RBP19.46■□□□□ 0.71
RGP1-202ENST00000496906 ACAT1P24752 427 aaKnown RBP19.46■□□□□ 0.71
RGP1-202ENST00000496906 PCSK1P29120 753 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 GNA15P30679 374 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 BPIFB4P59827 614 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 ERVK-21P61565 698 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 PTK2Q05397 1052 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 KIAA0319Q5VV43 1072 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 CRYBG2Q8N1P7 616 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 THEM5Q8N1Q8 247 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 OR10T2Q8NGX3 314 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 ACBD6Q9BR61 282 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 NKX2-4Q9H2Z4 354 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 NLRC5Q86WI3 1866 aa19.46■□□□□ 0.71
RGP1-202ENST00000496906 CALCAP01258 141 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 SERPING1P05155 500 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 RB1P06400 928 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 SKILP12757 684 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 CYP11B1P15538 503 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 PDE6CP51160 858 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 CDK17Q00537 523 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 KLHL30Q0D2K2 578 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 ZNF280DQ6N043 979 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 ANKS3Q6ZW76 656 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 ACOT1Q86TX2 421 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 LRRC8AQ8IWT6 810 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 PIK3R5Q8WYR1 880 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 TNIP3Q96KP6 325 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 SYT15Q9BQS2 421 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 ARHGAP20Q9P2F6 1191 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 NOCTQ9UK39 431 aaKnown RBP19.45■□□□□ 0.7
RGP1-202ENST00000496906 CDH9Q9ULB4 789 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 MTUS1Q9ULD2 1270 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 COLQQ9Y215 455 aaPredicted RBP19.45■□□□□ 0.7
RGP1-202ENST00000496906 LZTS1Q9Y250 596 aa19.45■□□□□ 0.7
RGP1-202ENST00000496906 PSMC1P62191 440 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 SMAD3P84022 425 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 DSG1Q02413 1049 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 TDRD12Q587J7 1177 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 NOP9Q86U38 636 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 TMEM139Q8IV31 216 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 VPS52Q8N1B4 723 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 B3GALNT2Q8NCR0 500 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 LNX1Q8TBB1 728 aaPredicted RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 HEXIM2Q96MH2 286 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 CHP1Q99653 195 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 ZSWIM1Q9BR11 485 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 SYT11Q9BT88 431 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 ZBP1Q9H171 429 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 HAUS4Q9H6D7 363 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 BZW2Q9Y6E2 419 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 A0A1W2PPC1 479 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 H7C4K7 107 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 TBC1D4O60343 1298 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 ATP2C2O75185 946 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 PLEKP08567 350 aaPredicted RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 VDRP11473 427 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 CD19P15391 556 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 PTPN1P18031 435 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 BRD2P25440 801 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 DNAJB2P25686 324 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 GLUD2P49448 558 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 CTXN3Q4LDR2 81 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 INTS6LQ5JSJ4 861 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 PPP2R2DQ66LE6 453 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 KIAA1841Q6NSI8 718 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 PRSS55Q6UWB4 352 aaPredicted RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 C12orf29Q8N999 325 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 RIN2Q8WYP3 895 aaPredicted RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 TFAP2BQ92481 460 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 DDX1Q92499 740 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 TMEM209Q96SK2 561 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 C11orf84Q9BUA3 381 aaPredicted RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 DNAI2Q9GZS0 605 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 ALG13Q9NP73 1137 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 CRTAC1Q9NQ79 661 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 MTRRQ9UBK8 725 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 PUF60Q9UHX1 559 aaKnown RBP19.44■□□□□ 0.7
RGP1-202ENST00000496906 KIAA1257Q9ULG3 409 aa19.44■□□□□ 0.7
RGP1-202ENST00000496906 TRIOBPQ9H2D6 2365 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 THAP12O43422 761 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 URODP06132 367 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 UBE3AQ05086 875 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 CCDC142Q17RM4 750 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 ZNF571Q7Z3V5 609 aaPredicted RBP19.43■□□□□ 0.7
RGP1-202ENST00000496906 GPR65Q8IYL9 337 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 OLIG1Q8TAK6 271 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 SPPL3Q8TCT6 385 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 SLC20A1Q8WUM9 679 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms