RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 CT47B1P0C2W7 299 aaPredicted RBP5.39□□□□□ -1.55
TRIM4-205ENST00000496896 PIM1P11309 404 aaPredicted RBP5.39□□□□□ -1.55
TRIM4-205ENST00000496896 TOB1P50616 345 aaPredicted RBP5.39□□□□□ -1.55
TRIM4-205ENST00000496896 C21orf58P58505 322 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 GTF2H3Q13889 308 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 PEG10Q86TG7 708 aaKnown RBP5.39□□□□□ -1.55
TRIM4-205ENST00000496896 DIS3LQ8TF46 1054 aaKnown RBP5.39□□□□□ -1.55
TRIM4-205ENST00000496896 SLC35A4Q96G79 324 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 PBKQ96KB5 322 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 PUS7Q96PZ0 661 aaKnown RBP5.39□□□□□ -1.55
TRIM4-205ENST00000496896 AMBRA1Q9C0C7 1298 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 CDH19Q9H159 772 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 SLAMF7Q9NQ25 335 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 NR2E3Q9Y5X4 410 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 RAD54BQ9Y620 910 aa5.39□□□□□ -1.55
TRIM4-205ENST00000496896 A0A088AWK7 358 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 H3BML4 177 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 H3BUI4 141 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 KIF20AO95235 890 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 ALDH2P05091 517 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 PHKA1P46020 1223 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 PTH2RP49190 550 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 HNRNPMP52272 730 aaKnown RBP eCLIP5.38□□□□□ -1.55
TRIM4-205ENST00000496896 IFIT1BQ5T764 474 aaKnown RBP5.38□□□□□ -1.55
TRIM4-205ENST00000496896 SFRP4Q6FHJ7 346 aaPredicted RBP5.38□□□□□ -1.55
TRIM4-205ENST00000496896 SLC30A10Q6XR72 485 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 TSHZ1Q6ZSZ6 1077 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 TFAP2BQ92481 460 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 SARAFQ96BY9 339 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 SPATA5L1Q9BVQ7 753 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 KLK15Q9H2R5 256 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 SMOC2Q9H3U7 446 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 RSAD1Q9HA92 442 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 NMRK2Q9NPI5 230 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 ARPP21Q9UBL0 812 aaPredicted RBP5.38□□□□□ -1.55
TRIM4-205ENST00000496896 PCDHA1Q9Y5I3 950 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 ADGRA2Q96PE1 1338 aa5.38□□□□□ -1.55
TRIM4-205ENST00000496896 MASP2O00187 686 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 URI1O94763 535 aaPredicted RBP5.37□□□□□ -1.55
TRIM4-205ENST00000496896 AHSGP02765 367 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 HSPA6P17066 643 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 CD6P30203 668 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 GCLCP48506 637 aaPredicted RBP5.37□□□□□ -1.55
TRIM4-205ENST00000496896 CCDC157Q569K6 752 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 COLEC12Q5KU26 742 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 RBM20Q5T481 1227 aaKnown RBP5.37□□□□□ -1.55
TRIM4-205ENST00000496896 TEDDM1Q5T9Z0 273 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 GRAMD1CQ8IYS0 662 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 SH2D3CQ8N5H7 860 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 KLHDC4Q8TBB5 520 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 JPH3Q8WXH2 748 aaPredicted RBP5.37□□□□□ -1.55
TRIM4-205ENST00000496896 RFKQ969G6 155 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 FAM136AQ96C01 138 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 CGRRF1Q99675 332 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 RTFDC1Q9BY42 306 aaPredicted RBP5.37□□□□□ -1.55
TRIM4-205ENST00000496896 TPSD1Q9BZJ3 242 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 SARS2Q9NP81 518 aaKnown RBP5.37□□□□□ -1.55
TRIM4-205ENST00000496896 MRPS18AQ9NVS2 196 aaKnown RBP5.37□□□□□ -1.55
TRIM4-205ENST00000496896 EHD3Q9NZN3 535 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 ZNF180Q9UJW8 692 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 MED16Q9Y2X0 877 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 PLEKHM1Q9Y4G2 1056 aa5.37□□□□□ -1.55
TRIM4-205ENST00000496896 VWC2LB2RUY7 222 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 M0QYG6 137 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 DNAJB5O75953 348 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 CHRM2P08172 466 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 ATXN1LP0C7T5 689 aaKnown RBP5.36□□□□□ -1.55
TRIM4-205ENST00000496896 U2AF1L5P0DN76 240 aaPredicted RBP5.36□□□□□ -1.55
TRIM4-205ENST00000496896 ITPKBP27987 946 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 VIPR2P41587 438 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 RAB27AP51159 221 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 SOX8P57073 446 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 KRTAP10-11P60412 298 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 MRPS21P82921 87 aaKnown RBP5.36□□□□□ -1.55
TRIM4-205ENST00000496896 U2AF1Q01081 240 aaKnown RBP eCLIP5.36□□□□□ -1.55
TRIM4-205ENST00000496896 EXOSC9Q06265 439 aaKnown RBP5.36□□□□□ -1.55
TRIM4-205ENST00000496896 AMOTQ4VCS5 1084 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 B3GNT9Q6UX72 402 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 GLCCI1Q86VQ1 547 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 DENND1CQ8IV53 801 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 FKBP10Q96AY3 582 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 MOGAT1Q96PD6 335 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 ACTRT3Q9BYD9 372 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 HESX1Q9UBX0 185 aa5.36□□□□□ -1.55
TRIM4-205ENST00000496896 DCAF1Q9Y4B6 1507 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 AP1G1O43747 822 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 NXPH3O95157 252 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 THP07101 528 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 ELFN1P0C7U0 828 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 GPD1P21695 349 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 PPIFP30405 207 aaKnown RBP5.35□□□□□ -1.55
TRIM4-205ENST00000496896 LOXL3P58215 753 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 RAB1AP62820 205 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 LONRF3Q496Y0 759 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 KHDC1LQ5JSQ8 128 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 PLAC9Q5JTB6 97 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 DTX2Q86UW9 622 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 FAM46DQ8NEK8 389 aa5.35□□□□□ -1.55
TRIM4-205ENST00000496896 SLC35G2Q8TBE7 412 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms