RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 NSUN4Q96CB9 384 aaKnown RBP9.53□□□□□ -0.88
HPS4-217ENST00000496385 COX4I2Q96KJ9 171 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 ARPC5LQ9BPX5 153 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 NACA2Q9H009 215 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 S100A14Q9HCY8 104 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
HPS4-217ENST00000496385 KANSL3Q9P2N6 904 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 STX8Q9UNK0 236 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 POLR2AP24928 1970 aaKnown RBP9.53□□□□□ -0.88
HPS4-217ENST00000496385 ANKRD63C9JTQ0 380 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 ADCY3O60266 1144 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 KRT38O76015 456 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 TNFAIP8O95379 198 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 BAG2O95816 211 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 FXR2P51116 673 aaKnown RBP eCLIP9.53□□□□□ -0.88
HPS4-217ENST00000496385 ZNF280AP59817 542 aaPredicted RBP9.53□□□□□ -0.88
HPS4-217ENST00000496385 ZNF423Q2M1K9 1284 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 PLEKHG4Q58EX7 1191 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 NOP9Q86U38 636 aaKnown RBP9.53□□□□□ -0.88
HPS4-217ENST00000496385 LCORLQ8N3X6 602 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 ZFP28Q8NHY6 868 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 CASP10Q92851 521 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 PANX3Q96QZ0 392 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 TTC1Q99614 292 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 CCT7Q99832 543 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 DDX18Q9NVP1 670 aaKnown RBP9.53□□□□□ -0.88
HPS4-217ENST00000496385 DAGLAQ9Y4D2 1042 aa9.53□□□□□ -0.88
HPS4-217ENST00000496385 C15orf38-AP3S2A0A0A6YYH1 394 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 ADM5C9JUS6 153 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 BOLA2-SMG1P6H3BVE0 249 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 TM9SF1O15321 606 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 SLC26A4O43511 780 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 PRKAB2O43741 272 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 TYROBPO43914 113 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 CETPP11597 493 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 SLC9A1P19634 815 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 CYP7A1P22680 504 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 PPARGP37231 505 aaPredicted RBP9.52□□□□□ -0.88
HPS4-217ENST00000496385 NUP107P57740 925 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 DYNLL1P63167 89 aaKnown RBP9.52□□□□□ -0.88
HPS4-217ENST00000496385 COG7P83436 770 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 CDK18Q07002 472 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 COASYQ13057 564 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 TMED2Q15363 201 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 NADK2Q4G0N4 442 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 ANKS1BQ7Z6G8 1248 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 ARPINQ7Z6K5 226 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 LNX1Q8TBB1 728 aaPredicted RBP9.52□□□□□ -0.88
HPS4-217ENST00000496385 PYROXD1Q8WU10 500 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 SPOCK2Q92563 424 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 ALKBH8Q96BT7 664 aaKnown RBP9.52□□□□□ -0.88
HPS4-217ENST00000496385 SGF29Q96ES7 293 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.88
HPS4-217ENST00000496385 GLIS2Q9BZE0 524 aaPredicted RBP9.52□□□□□ -0.88
HPS4-217ENST00000496385 CRNKL1Q9BZJ0 848 aaKnown RBP9.52□□□□□ -0.88
HPS4-217ENST00000496385 UBAP1Q9NZ09 502 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 TBK1Q9UHD2 729 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 SLC24A2Q9UI40 661 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 PLA2G4CQ9UP65 541 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.52□□□□□ -0.88
HPS4-217ENST00000496385 SCN4AP35499 1836 aa9.52□□□□□ -0.88
HPS4-217ENST00000496385 CCDC160A6NGH7 325 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 B2RBV5 119 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 TCP10L2B9ZVM9 353 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 FBP2O00757 339 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 MTA2O94776 668 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 PDGFRBP09619 1106 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 CA4P22748 312 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 IVDP26440 423 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 CHKAP35790 457 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 KRT17Q04695 432 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 TCP10Q12799 353 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 ZBTB17Q13105 803 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 ITGA7Q13683 1181 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 KRT81Q14533 505 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 NONOQ15233 471 aaKnown RBP eCLIP9.52□□□□□ -0.89
HPS4-217ENST00000496385 EPHA7Q15375 998 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 SIX1Q15475 284 aaPredicted RBP9.52□□□□□ -0.89
HPS4-217ENST00000496385 RWDD4Q6NW29 188 aaKnown RBP9.52□□□□□ -0.89
HPS4-217ENST00000496385 ANO5Q75V66 913 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 DYMQ7RTS9 669 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 NANOGNBQ7Z5D8 188 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 SDR16C5Q8N3Y7 309 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 ICA1LQ8NDH6 482 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 MTBPQ96DY7 904 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 HSPBAP1Q96EW2 488 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 PNMA5Q96PV4 448 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 SYT11Q9BT88 431 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 KCTD10Q9H3F6 313 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 FETUBQ9UGM5 382 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 ANAPC5Q9UJX4 755 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 FZD1Q9UP38 647 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 NUMBLQ9Y6R0 609 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 GOLGA8TH3BQL2 631 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 FSCN2O14926 492 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 MAGEB3O15480 346 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 GOLGA8HP0CJ92 632 aa9.52□□□□□ -0.89
HPS4-217ENST00000496385 SOX5P35711 763 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms